DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx5 and stx5a

DIOPT Version :9

Sequence 1:NP_523582.4 Gene:Syx5 / 34966 FlyBaseID:FBgn0011708 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001002333.1 Gene:stx5a / 436605 ZFINID:ZDB-GENE-040718-18 Length:302 Species:Danio rerio


Alignment Length:317 Identity:179/317 - (56%)
Similarity:237/317 - (74%) Gaps:22/317 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 MAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYAKLEKLT 222
            |..||||.||.:|.:|||.|.:....:.:....|  ::..|:|.::|:.|||::::|:|||||||
Zfish     1 MTCRDRTLEFQSACKSLQGRQLQNGTHSKPANNA--LKQRSDFTLMAKRIGKDLSNTFAKLEKLT 63

  Fly   223 MLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTNGKHLVSHSSNMVLALQ 287
            :|||:||||||:..||:|||||||.|:|:||:|||:|||:.: .|...||:|:.:||:.:|::||
Zfish    64 ILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVR-SRSGQNGRHIQTHSNTIVVSLQ 127

  Fly   288 SKLASMSTDFKQILEVRTENLKQQKTRRDQFSQGP---GPLAAHTVSPSTAKQGSLLLSEENQA- 348
            |||||||.|||.:|||||||||||::||:.|||.|   .||.|:..:      .|:|:.:|::: 
Zfish   128 SKLASMSNDFKSVLEVRTENLKQQRSRREHFSQAPVSASPLLANNFN------SSVLMQDESRSL 186

  Fly   349 ---VSIDMGSSDTTPLLSTQTQMAIYDDSDNYVQQRAETMQNIESTIVELGGIFQQLAHMVKEQE 410
               |:||| .|...||     |:.:.|:.|:|:|.||:|||||||||||||.|||||||||||||
Zfish   187 GAEVAIDM-DSRANPL-----QLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQE 245

  Fly   411 EIVERIDTNVADAELNIEAAHGEILKYFQSVSKNRWLMIKIFGVLIFFFLFFVVFMS 467
            |.::|||.||.|.|||:|.|||||||||||||.|||||||||.|||.||:.||||::
Zfish   246 ETIQRIDANVDDTELNVEMAHGEILKYFQSVSSNRWLMIKIFLVLIVFFVIFVVFLA 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx5NP_523582.4 SNARE_syntaxin5 379..451 CDD:277197 59/71 (83%)
stx5aNP_001002333.1 Syntaxin-5_N 1..20 CDD:288298 11/18 (61%)
COG5325 <129..271 CDD:227635 88/153 (58%)
SNARE_syntaxin5 213..285 CDD:277197 58/71 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585965
Domainoid 1 1.000 226 1.000 Domainoid score I2454
eggNOG 1 0.900 - - E1_KOG0812
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2381
Inparanoid 1 1.050 328 1.000 Inparanoid score I2445
OMA 1 1.010 - - QHG53826
OrthoDB 1 1.010 - - D1297427at2759
OrthoFinder 1 1.000 - - FOG0003050
OrthoInspector 1 1.000 - - otm26426
orthoMCL 1 0.900 - - OOG6_102103
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1315
SonicParanoid 1 1.000 - - X2031
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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