DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx5 and Syx16

DIOPT Version :9

Sequence 1:NP_523582.4 Gene:Syx5 / 34966 FlyBaseID:FBgn0011708 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_523420.1 Gene:Syx16 / 33034 FlyBaseID:FBgn0031106 Length:352 Species:Drosophila melanogaster


Alignment Length:409 Identity:87/409 - (21%)
Similarity:157/409 - (38%) Gaps:105/409 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 DYSDDKYGKAARQWNLRAFSGHALRTLSAAAAVVTGNQPGINNDSQSNYSYPASIPT------SS 137
            ::.||:.|..|.:     ...|::|..          :.|:  :.|.:|..|   |.      .:
  Fly    22 NHYDDRRGSDAER-----LLKHSVREA----------EEGL--ELQDDYGTP---PAWLDKFEEA 66

  Fly   138 QFYQSKEEPQETEPEPEIFVMAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMM 202
            |:..||.:|:..|                    :.||.||::.|      |....|.....:..:
  Fly    67 QYTMSKIKPKLDE--------------------LGSLHARHLLR------PAFDDQRDDECDIEV 105

  Fly   203 VARFIGKNIASTY-------------AKLEK-LTMLAKKKSLFDDRPQEIQELTYIIKGDLNALN 253
            :::.:.|.|.||:             :|:|: ||:.|...:|.     ::||||...:...||..
  Fly   106 LSQIVSKLITSTHRHIQCVRSSIGVGSKMEQCLTVNAVHCALL-----QLQELTVKFRASQNAYL 165

  Fly   254 QQIARLQDISKDQRRHTNGKHLVSHSSNMVLALQSKLASMSTDFKQILEVRTENLKQQKTRRDQF 318
            .|:...::.|:.......|.......:|:.|..||                .||....   .|.|
  Fly   166 LQLNSREERSQKYFDDGGGAGAGDVFTNVELGEQS----------------AENFVDS---FDNF 211

  Fly   319 SQGPGPLAAHTVSPSTAKQGS-LLLSEENQAVSIDMGSSDTTPLLSTQTQMAIYDDSDNYV-QQR 381
            .|          .|:..|.|: .|..::.||:.........:.:  ||.|:.::::.:..| |.|
  Fly   212 LQ----------PPAEGKSGNGYLFEDDEQAIDDHFQRPPASRM--TQQQLLLFEEENTRVAQHR 264

  Fly   382 AETMQNIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAHGEILKYFQSVSKNRW 446
            .:.:..|..:|.:|..||:.|.|||:||..:::|||.||...:..:.....::.|......|||.
  Fly   265 EQEVTKIVKSIYDLNDIFKDLGHMVQEQGTVLDRIDYNVEQTQTRVSEGLRQLHKAEMYQRKNRK 329

  Fly   447 L-MIKIFGVLIFFFLFFVV 464
            : :|.:...:.||.|..::
  Fly   330 MCVILVLAAVTFFMLLLLI 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx5NP_523582.4 SNARE_syntaxin5 379..451 CDD:277197 23/72 (32%)
Syx16NP_523420.1 SNARE_syntaxin16 261..319 CDD:277198 18/57 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467326
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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