DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syx5 and Syx4

DIOPT Version :9

Sequence 1:NP_523582.4 Gene:Syx5 / 34966 FlyBaseID:FBgn0011708 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster


Alignment Length:393 Identity:68/393 - (17%)
Similarity:133/393 - (33%) Gaps:116/393 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LRTLSAAAAVVTGNQPGINNDSQSNYSYPASIPTSSQFYQSKEEPQETEPEPEIFVMAARDRTGE 166
            |...|.....:.||..|.||    :||.     .|...:........|||         :||:..
  Fly    29 LNVYSGTTEFIIGNTGGNNN----SYSV-----VSQNSHSCSNNNSSTEP---------KDRSSS 75

  Fly   167 FANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYAKLEKLTMLAKKKSLF 231
            ......|    |:...:|           .|:|       |.:.:|...|.||.:..:|:..:|.
  Fly    76 KMTQYGS----NVDDILN-----------PYTE-------IRQQLAQIAANLETMNRMAQTVNLR 118

  Fly   232 DDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTNGKHLVSHSSNMVLALQSKLASMSTD 296
            .....|:.||                                    |:.|  |.|.::|.:...|
  Fly   119 TFNENEMDEL------------------------------------HNKN--LRLGNQLMTRFND 145

  Fly   297 FKQILEVRTENLKQQKTRRDQF----------------------SQGPGPLAAHTV---SPSTAK 336
            ||..|....:...:.:.:|..|                      ::....|..||.   |.::.:
  Fly   146 FKANLPAENDYSLEARMKRTLFYGLHQTFINLWHKNELFLQNYETKVKKNLRLHTKIINSEASEQ 210

  Fly   337 QGSLLLSEENQAVSIDMGSSDTTPLLSTQTQMAIYDDSDNYVQQRAETMQNIESTIVELGGIFQQ 401
            :..||:..:...:.:|....:|.....|..:|          ..|...::.:|.:|.|:..:|.:
  Fly   211 EIELLIENKTTKLFVDNFLQETEKERQTLREM----------MDRFNELRRLEKSIEEVHALFMR 265

  Fly   402 LAHMVKEQEEIVERIDTNVADAELNIEAAHGEI---LKYFQSVSKNRWLMIKIFGVLIFFFLFFV 463
            :..:|.||.|:::|::.:...|.|:::....|:   .::.:...|.:.::|.|...::...|...
  Fly   266 IQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKKARKKKIMLIVILAAVLLVLLLVG 330

  Fly   464 VFM 466
            :::
  Fly   331 IYL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx5NP_523582.4 SNARE_syntaxin5 379..451 CDD:277197 15/74 (20%)
Syx4NP_525057.2 Syntaxin 93..273 CDD:279182 38/234 (16%)
SNARE_syntaxin1-like 238..298 CDD:277201 14/69 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467324
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19957
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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