DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syx5 and sed5

DIOPT Version :9

Sequence 1:NP_523582.4 Gene:Syx5 / 34966 FlyBaseID:FBgn0011708 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_595576.1 Gene:sed5 / 2541263 PomBaseID:SPBC8D2.14c Length:309 Species:Schizosaccharomyces pombe


Alignment Length:316 Identity:131/316 - (41%)
Similarity:189/316 - (59%) Gaps:18/316 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 MAARDRTGEFANAIRSLQARNITRAVN--IRDPRKAKQVQSYSEFMMVARFIGKNIASTYAKLEK 220
            |:.:|||.||...:...::|..|...|  :..|.:.|..:  |||..:|:.|...|..|..||:|
pombe     1 MSFQDRTAEFQACVTKTRSRLRTTTANQAVGGPDQTKHQK--SEFTRIAQKIANQINQTGEKLQK 63

  Fly   221 LTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTNGKHLVSHSSNMVLA 285
            |:.|||:|:||||||.||||||:.||..|::||..||.||.:.|..|  .....:..||.|:|::
pombe    64 LSQLAKRKTLFDDRPVEIQELTFQIKQSLSSLNSDIASLQQVVKGNR--NKPAQMNQHSENVVVS 126

  Fly   286 LQSKLASMSTDFKQILEVRTENLKQQKTRRDQF----SQGPGPL--AAHTVSPSTAKQGSLLLSE 344
            ||:.||:.|..||.|||:||:|:|..:.|.::|    |....||  :.:::||..........:.
pombe   127 LQNSLANTSMTFKDILEIRTQNMKASQNRTEKFVASSSMNANPLINSGNSISPFADYNDPKPEAN 191

  Fly   345 ENQAVSIDMGSSDTTPLLSTQTQMAIYD-DSDNYVQQRAETMQNIESTIVELGGIFQQLAHMVKE 408
            |:. :|:::|....|    ...|||:.: .:|.|.|||..::|||||||.||||||.|||.||.|
pombe   192 EDY-LSLNLGDGANT----RYEQMALLESQTDTYSQQRMSSIQNIESTITELGGIFSQLAQMVSE 251

  Fly   409 QEEIVERIDTNVADAELNIEAAHGEILKYFQSVSKNRWLMIKIFGVLIFFFLFFVV 464
            |.|.|:|||.:..|...||.:|..||:|:::.:|.||.|:.||||::|.|||.:|:
pombe   252 QRETVQRIDMHTDDIVSNIGSAQREIVKFYERMSSNRALLFKIFGIVIIFFLLWVL 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx5NP_523582.4 SNARE_syntaxin5 379..451 CDD:277197 39/71 (55%)
sed5NP_595576.1 Syntaxin-18_N 5..>56 CDD:287468 16/52 (31%)
COG5325 54..304 CDD:227635 113/256 (44%)
SNARE_syntaxin5 221..306 CDD:277197 47/84 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1099
eggNOG 1 0.900 - - E1_KOG0812
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2381
Inparanoid 1 1.050 209 1.000 Inparanoid score I956
OMA 1 1.010 - - QHG53826
OrthoFinder 1 1.000 - - FOG0003050
OrthoInspector 1 1.000 - - oto100705
orthoMCL 1 0.900 - - OOG6_102103
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1315
SonicParanoid 1 1.000 - - X2031
TreeFam 1 0.960 - -
1413.860

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