DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GMF and TWF1

DIOPT Version :10

Sequence 1:NP_609787.2 Gene:GMF / 34963 FlyBaseID:FBgn0028894 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_011594.3 Gene:TWF1 / 852971 SGDID:S000003312 Length:332 Species:Saccharomyces cerevisiae


Alignment Length:134 Identity:37/134 - (27%)
Similarity:62/134 - (46%) Gaps:26/134 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NEVLEELKKFRFSKSKNNAALILKVDREKQTVVLDEFIDDISVDELQDTLPGHQPRYVIYTYKMV 75
            ||:|:       |:.||  .:|.::|...:|:.:.:.....|||||...|||  |.|.|:     
Yeast   187 NEILD-------SEGKN--LIIFQIDPSNETIQIVQSDTCPSVDELYIDLPG--PSYTIF----- 235

  Fly    76 HDDQRISYPMCFIFYTPRDSQIELQMMYACTKSAL------QREVDLTRVYEIRELDELTEEWLK 134
                |......||:..|..|:::.:|:||..|:..      .:::..::|.||.:..||.:..|.
Yeast   236 ----RQGDSSFFIYSCPSGSKVKDRMIYASNKNGFINYLKNDQKIAFSKVVEIGDFVELDKSLLM 296

  Fly   135 AKLK 138
            |..|
Yeast   297 ATNK 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GMFNP_609787.2 ADF_GMF-beta_like 8..129 CDD:200439 33/123 (27%)
TWF1NP_011594.3 ADF_Twf-N_like 4..124 CDD:200441
ADF_Twf-C_like 175..297 CDD:200440 35/129 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.