DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GMF and gmfg

DIOPT Version :9

Sequence 1:NP_609787.2 Gene:GMF / 34963 FlyBaseID:FBgn0028894 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_001035136.1 Gene:gmfg / 677752 ZFINID:ZDB-GENE-060331-89 Length:142 Species:Danio rerio


Alignment Length:132 Identity:67/132 - (50%)
Similarity:102/132 - (77%) Gaps:0/132 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ICDISNEVLEELKKFRFSKSKNNAALILKVDREKQTVVLDEFIDDISVDELQDTLPGHQPRYVIY 70
            :|::.:.:.|:||||||.|..:|||:::|:|.:||.|||:|..:|||:|||::.||..||||::|
Zfish     7 VCEVDDGLQEKLKKFRFRKETSNAAILMKIDMQKQLVVLEEEYEDISLDELREELPERQPRYIVY 71

  Fly    71 TYKMVHDDQRISYPMCFIFYTPRDSQIELQMMYACTKSALQREVDLTRVYEIRELDELTEEWLKA 135
            :||:.|.|.|:|||:||||.:|...:.|.|||||.:|:.|.:..:||:::|:|..|:|||:|||.
Zfish    72 SYKLTHGDGRVSYPLCFIFCSPVGCKPEQQMMYAGSKNRLVQSAELTKIFEVRNPDDLTEDWLKQ 136

  Fly   136 KL 137
            ||
Zfish   137 KL 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GMFNP_609787.2 ADF_GMF-beta_like 8..129 CDD:200439 58/120 (48%)
gmfgNP_001035136.1 ADF_GMF-beta_like 9..130 CDD:200439 58/120 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1477747at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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