DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17328 and znf271

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_001333332.1 Gene:znf271 / 793549 ZFINID:ZDB-GENE-091204-74 Length:1089 Species:Danio rerio


Alignment Length:510 Identity:123/510 - (24%)
Similarity:170/510 - (33%) Gaps:192/510 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DYNIHKICRVCLEELHPVTSIYSTDFAMMPSVMLMQCAKIRVF------KTDGLPSVICNNC--- 57
            |...|::.....:..|.|..:  .:||::.|:.    ..:|.|      .|:| ..:||..|   
Zfish   100 DLKTHQLVHTDAKAFHCVICV--KNFALLSSLK----RHLRAFHQGEDVSTEG-KCLICVECGKN 157

  Fly    58 ---------IYRLGVAFHFKQECENS------------------------DLRLRQYLGILESWR 89
                     :...|...|...:|.||                        |....:..|.|.|..
Zfish   158 FDCDLEEHELTHTGEISHRCPDCVNSFSDPSNLTSHDQTFSESDHVHHLEDNDNERPCGSLASED 222

  Fly    90 QDAATNTDFVEKPLLPQRDSDEEEPVD--------------AKVSKRRSRYQRKPPEEH------ 134
            .|....||       |..|..|.:.|:              |::....:.....|..||      
Zfish   223 VDRHLQTD-------PLNDCGEAQSVEFADNIESDGFNESSAQIQLEEAERAASPSSEHSLDSAQ 280

  Fly   135 KKRGPKPVP--------------KMPHTCYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFA 185
            |..||...|              :.|:.|..|.|.|...|:|..|:|.||||||||||.|.:.|:
Zfish   281 KDTGPGYAPPDEEFTADQQSSDEEKPYQCNHCEKRFNKQAKLRIHLRVHTGEKPYQCSQCGKHFS 345

  Fly   186 QKYNLKVHERT-HTGDKPFQCEICSKQFSA--------------------------------LGN 217
            |..|||.|.|| ||.:||:||.||.::||.                                .|.
Zfish   346 QDVNLKKHYRTHHTEEKPYQCMICDRKFSVSFSLIKHQRVAHPECLSVAERKRFTCPFCGKIFGR 410

  Fly   218 FQ-------------------------------AHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMI 251
            .|                               .|:|||.|.:...|.:|.:.||.:|||..||.
Zfish   411 HQDMEQHKRTHTDERPFRCNVCNKSFRQRSVLIVHRKIHTGEKPFECFVCCRRFYGSGDLKTHMG 475

  Fly   252 THTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHD-------IVDD-----------DDD 298
            |||||:.|.|.:|.|:|.|...::.|.|. |..:....:|       .::|           .:|
Zfish   476 THTGIRPHSCPLCSKSFPRPSSLQAHMLS-HVNKQQDRNDGGFPQEEELEDACGASGSSAMLSED 539

  Fly   299 EAIDTDPVGLD-----TLDH-----------AHFK---CPDCDKAFDTADSLSLH 334
            :..:....|:|     ..||           .|.|   |..|.|.|..|.||..|
Zfish   540 KTSNQSETGMDLSLSANQDHDANPSSSSELPDHQKPYFCIICGKTFALATSLRKH 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 18/113 (16%)
COG5048 146..>211 CDD:227381 36/65 (55%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
C2H2 Zn finger 177..197 CDD:275368 11/20 (55%)
zf-H2C2_2 189..213 CDD:404364 14/24 (58%)
C2H2 Zn finger 205..225 CDD:275368 9/82 (11%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
zf-H2C2_2 245..270 CDD:404364 14/24 (58%)
C2H2 Zn finger 261..282 CDD:275368 7/20 (35%)
C2H2 Zn finger 318..338 CDD:275368 8/17 (47%)
znf271XP_001333332.1 COG5048 28..508 CDD:227381 106/422 (25%)
C2H2 Zn finger 60..80 CDD:275368
zf-H2C2_2 72..97 CDD:290200
C2H2 Zn finger 88..108 CDD:275368 2/7 (29%)
C2H2 Zn finger 116..134 CDD:275368 4/23 (17%)
C2H2 Zn finger 151..169 CDD:275370 2/17 (12%)
C2H2 Zn finger 177..193 CDD:275370 3/15 (20%)
C2H2 Zn finger 309..329 CDD:275368 8/19 (42%)
zf-H2C2_2 322..346 CDD:290200 15/23 (65%)
C2H2 Zn finger 337..358 CDD:275368 11/20 (55%)
C2H2 Zn finger 366..385 CDD:275368 5/18 (28%)
C2H2 Zn finger 401..421 CDD:275368 2/19 (11%)
C2H2 Zn finger 429..449 CDD:275368 2/19 (11%)
C2H2 Zn finger 457..477 CDD:275368 9/19 (47%)
C2H2 Zn finger 485..505 CDD:275368 7/20 (35%)
C2H2 Zn finger 578..599 CDD:275368 8/17 (47%)
COG5048 609..994 CDD:227381
C2H2 Zn finger 613..633 CDD:275368
zf-H2C2_2 626..650 CDD:290200
C2H2 Zn finger 641..661 CDD:275368
C2H2 Zn finger 669..689 CDD:275368
C2H2 Zn finger 697..717 CDD:275368
C2H2 Zn finger 746..766 CDD:275368
C2H2 Zn finger 774..794 CDD:275368
C2H2 Zn finger 802..821 CDD:275368
C2H2 Zn finger 830..851 CDD:275368
C2H2 Zn finger 859..879 CDD:275368
C2H2 Zn finger 890..910 CDD:275368
C2H2 Zn finger 917..937 CDD:275368
C2H2 Zn finger 947..967 CDD:275368
zf-H2C2_2 959..984 CDD:290200
C2H2 Zn finger 975..995 CDD:275368
zf-H2C2_2 987..1012 CDD:290200
C2H2 Zn finger 1003..1022 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.