DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and Zfp566

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001128198.1 Gene:Zfp566 / 502316 RGDID:1563239 Length:386 Species:Rattus norvegicus


Alignment Length:228 Identity:76/228 - (33%)
Similarity:104/228 - (45%) Gaps:33/228 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EEPVDAKVSKRRSRYQRKPPEEHKKRGPKPVPKMPHTCYECHKSFKCIAQLTQHIRTHTGEKPYQ 176
            |:|.:.|...:..|:.......||..    ..|.|..|.||.|:|.|.:.||:|.|.|||||||:
  Rat   164 EKPYECKDCGKTFRHPSGLTHHHKIH----TGKKPFECKECGKTFICGSDLTRHHRIHTGEKPYE 224

  Fly   177 CSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVCSLCQKGFY 241
            |..|.:.|:...|...|:|.|||:||::|:.|.|.||:..||..||:||.|.:...|..|...|.
  Rat   225 CKDCGKAFSSGSNFTRHQRIHTGEKPYECKECGKAFSSGSNFTQHQRIHTGEKPYECKECGNAFS 289

  Fly   242 TAGDLSKHMITHTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDPV 306
            .:..|.||...|||.|.:.|..|.|||....|:..|: ::|..|..                   
  Rat   290 QSSQLIKHQRIHTGEKPYECKECEKAFRSGSDLTRHQ-RIHTGEKP------------------- 334

  Fly   307 GLDTLDHAHFKCPDCDKAFDTADSLSLHFRTHA 339
                     ::|..|.||:..:..|..|.|.||
  Rat   335 ---------YECKICGKAYSQSSQLISHHRIHA 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 31/64 (48%)
C2H2 Zn finger 149..169 CDD:275368 10/19 (53%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
zf-H2C2_2 189..213 CDD:404364 11/23 (48%)
C2H2 Zn finger 205..225 CDD:275368 9/19 (47%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:404364 12/24 (50%)
C2H2 Zn finger 261..282 CDD:275368 7/20 (35%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
Zfp566NP_001128198.1 KRAB 5..45 CDD:396083
zf-C2H2 167..189 CDD:395048 4/21 (19%)
C2H2 Zn finger 169..189 CDD:275368 4/19 (21%)
COG5048 <193..355 CDD:227381 66/190 (35%)
C2H2 Zn finger 197..217 CDD:275368 10/19 (53%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..273 CDD:275368 9/19 (47%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 309..329 CDD:275368 7/20 (35%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
C2H2 Zn finger 365..384 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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