DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and su(Hw)

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster


Alignment Length:372 Identity:96/372 - (25%)
Similarity:149/372 - (40%) Gaps:80/372 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IHKICRVCLEELHPVTSI--------YSTDFAMMPSVMLMQCAKIR-----VFKTDGLPSVICNN 56
            :..:|..|.:....|.|:        |.:.:.:..:.||....||.     :.|.|     ||..
  Fly   218 VEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRKADMLKNLEKIEKDAVVMEKKD-----ICFC 277

  Fly    57 C-----IYRLGVAFHFK-QECENS---DLRLRQYLGILESWRQD---AATNTDFVEKPLLPQRDS 109
            |     .:.||   |.. .:|..|   .....:::.|..|...|   :..|.:...:.||...:.
  Fly   278 CSESYDTFHLG---HINCPDCPKSFKTQTSYERHIFITHSEFSDFPCSICNANLRSEALLALHEE 339

  Fly   110 DEE---EPVDAKVSKR---RSRYQRKPPEEHKKRGPKPVPKMPHTCYECHKSFKCIAQLTQHIRT 168
            ..:   :|...|:..:   || |..|..:::..........|  :|..|.:.|..:..|..|::.
  Fly   340 QHKSRGKPYACKICGKDFTRS-YHLKRHQKYSSCSSNETDTM--SCKVCDRVFYRLDNLRSHLKQ 401

  Fly   169 HTG----EKP-YQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLGV 228
            |.|    :|| |.|..|...|.....|.:|.|||||:|||.|::|.|:||||...:.|::.|.|.
  Fly   402 HLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGE 466

  Fly   229 RDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAFSRRRDMRTH-KLKLHPLESSTNHDI 292
            :...|::|.:.|.....|::||..|||.:.|.||.|||:|.:...:||| |..:.|         
  Fly   467 KPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQATQLRTHSKTHIRP--------- 522

  Fly   293 VDDDDDEAIDTDPVGLDTLDHAHFKCPDCDKAFDTADSLSLHFRTHA 339
                                   |.|..||:.|.|...|..|.:||:
  Fly   523 -----------------------FPCEQCDEKFKTEKQLERHVKTHS 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 19/93 (20%)
COG5048 146..>211 CDD:227381 25/69 (36%)
C2H2 Zn finger 149..169 CDD:275368 5/19 (26%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
zf-H2C2_2 189..213 CDD:404364 13/23 (57%)
C2H2 Zn finger 205..225 CDD:275368 8/19 (42%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:404364 13/24 (54%)
C2H2 Zn finger 261..282 CDD:275368 10/21 (48%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 3/20 (15%)
COG5048 <312..517 CDD:227381 64/207 (31%)
C2H2 Zn finger 321..341 CDD:275368 3/19 (16%)
zf-C2H2 348..368 CDD:278523 5/20 (25%)
C2H2 Zn finger 350..368 CDD:275368 5/18 (28%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
zf-H2C2_2 428..451 CDD:290200 13/22 (59%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
zf-H2C2_2 455..479 CDD:290200 5/23 (22%)
COG5048 <467..620 CDD:227381 31/112 (28%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
zf-H2C2_2 484..508 CDD:290200 13/23 (57%)
C2H2 Zn finger 499..519 CDD:275368 10/19 (53%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446719
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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