DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and CG5245

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster


Alignment Length:350 Identity:101/350 - (28%)
Similarity:138/350 - (39%) Gaps:98/350 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KICRVCL--EELHPVTSIYSTDFAMMPSVMLMQC----AKIRVFK--TDGLPSVICNNCIYRLGV 63
            ||...|.  ::|.||..:        || .|..|    ||.|..:  ||......|.....|   
  Fly    41 KIENFCSYGKDLEPVKGV--------PS-KLKTCKSKIAKKRPLRKQTDTFKCTQCQKTFTR--- 93

  Fly    64 AFHFKQECENSDLRLRQYLGILESWRQDAATNTDFVEKPLLPQRDSDEEEPVD----AKVSKRRS 124
                |:..| |.|||..                              ||.|.:    :|...||:
  Fly    94 ----KENLE-SHLRLHA------------------------------EERPFECSHCSKSFGRRT 123

  Fly   125 RYQRKPPEEHKKRGPKPVPKMPHTCYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYN 189
            .|:|. ..:|:||        ||.|..|.|:|...:.|.||:..||||:|::|:.|...||:|.:
  Fly   124 HYKRH-LLKHEKR--------PHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSH 179

  Fly   190 LKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHT 254
            |:||.|||:.::||:|..|.|.|....:.|.|.:.|...|...||.|.|.|.....|.||::||.
  Fly   180 LQVHLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHA 244

  Fly   255 GIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDPVGLDTLDHAHFKCP 319
            . ::..|..|.|.|.:...::.| |::|..|                  ||          ||||
  Fly   245 E-RSFKCTQCPKTFLQNDSLQIH-LRVHAGE------------------DP----------FKCP 279

  Fly   320 DCDKAFDTADSLSLHFRTHAANNNL 344
            .|.:.|.....|.||...||....|
  Fly   280 HCSETFARNSRLQLHLLEHAGKEPL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 22/79 (28%)
COG5048 146..>211 CDD:227381 29/64 (45%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
C2H2 Zn finger 177..197 CDD:275368 9/19 (47%)
zf-H2C2_2 189..213 CDD:404364 11/23 (48%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
zf-H2C2_2 245..270 CDD:404364 9/24 (38%)
C2H2 Zn finger 261..282 CDD:275368 6/20 (30%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
CG5245NP_650197.1 COG5048 74..478 CDD:227381 87/307 (28%)
C2H2 Zn finger 84..104 CDD:275368 7/27 (26%)
C2H2 Zn finger 112..132 CDD:275368 5/20 (25%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
zf-H2C2_2 179..204 CDD:290200 12/24 (50%)
C2H2 Zn finger 195..215 CDD:275368 6/19 (32%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 6/20 (30%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368
C2H2 Zn finger 334..354 CDD:275368
C2H2 Zn finger 362..382 CDD:275368
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 418..438 CDD:275368
C2H2 Zn finger 446..466 CDD:275368
C2H2 Zn finger 474..492 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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