DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and CG8319

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster


Alignment Length:378 Identity:86/378 - (22%)
Similarity:144/378 - (38%) Gaps:82/378 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ICRVCLEELHPVTSIYS------TDFAMMPSVMLMQCAKIRVFKTDGLPSVICNNCIYRLGVAFH 66
            :||:|......:..|:.      .|.|.: :.|:..||.:::...|.:|..:|.:|::....|:.
  Fly     4 LCRICGGASENMLGIFDDQVEEYVDGAKL-AEMVKTCADVQLDPDDAMPQKMCISCVHDARTAYG 67

  Fly    67 FKQECENSDLRLRQYLGILESW-RQDAATNTD--FVEKPLLPQRDSDEEEPVDAKVSKRRSRYQR 128
            ||:.||.:..:.  ||.||... .:|.....|  |:|.|  .:.:.:.::.::.::.|......|
  Fly    68 FKRRCEENYKKF--YLAILNGQVIKDEPNEEDFLFIENP--DKGNLEAKKKLNKEIKKTHQTASR 128

  Fly   129 KPPE----EHKKRGPKPVPKMPHTCYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYN 189
            ....    ....|..:.:......|..|.|.||....|..|::.|:..  :.|..|.:||..|.:
  Fly   129 TTKSSITTSRAGRQLRSIKNQTFKCELCIKQFKRQINLLDHMKVHSNS--HVCQNCEERFLFKAD 191

  Fly   190 -------------------LKVHERTHTGD----------KPFQCEICSKQFSALGNFQAHQKIH 225
                               |||...|.:.|          .||||..|.:.|:...|.:||..||
  Fly   192 LDNHQCYRNSNSTVECPECLKVFSSTQSLDSHKCKDMQERSPFQCPHCQQAFTREQNLKAHLLIH 256

  Fly   226 L----GVRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLES 286
            .    |.....||.||.||:....|..|:..|.|.:.|.|..|...|..::.::.| :::|..|.
  Fly   257 AESKQGNGPHKCSYCQTGFFNKSALKVHIHAHMGERPHACPFCVSNFRSKQALKVH-IRIHTGEK 320

  Fly   287 STNHDIVDDDDDEAIDTDPVGLDTLDHAHFKCPDCDKAFDTADSLSLHFRTHA 339
            .                            ::||.|.|.|...::|:.|.|.|:
  Fly   321 P----------------------------YQCPHCPKTFSDNNNLAKHRRRHS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 18/77 (23%)
COG5048 146..>211 CDD:227381 23/93 (25%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
C2H2 Zn finger 177..197 CDD:275368 8/38 (21%)
zf-H2C2_2 189..213 CDD:404364 10/52 (19%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
zf-H2C2_2 245..270 CDD:404364 8/24 (33%)
C2H2 Zn finger 261..282 CDD:275368 4/20 (20%)
C2H2 Zn finger 318..338 CDD:275368 8/19 (42%)
CG8319NP_649920.2 zf-AD 4..79 CDD:285071 18/75 (24%)
COG5048 <153..368 CDD:227381 56/224 (25%)
C2H2 Zn finger 153..173 CDD:275368 7/19 (37%)
C2H2 Zn finger 179..196 CDD:275368 5/16 (31%)
C2H2 Zn finger 207..227 CDD:275370 5/19 (26%)
C2H2 Zn finger 236..256 CDD:275368 6/19 (32%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
C2H2 Zn finger 296..316 CDD:275368 4/20 (20%)
zf-H2C2_2 308..332 CDD:290200 7/52 (13%)
zf-C2H2 322..344 CDD:278523 8/21 (38%)
C2H2 Zn finger 324..344 CDD:275368 8/19 (42%)
C2H2 Zn finger 352..368 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449780
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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