DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17328 and CG7963

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_649798.3 Gene:CG7963 / 41001 FlyBaseID:FBgn0037584 Length:354 Species:Drosophila melanogaster


Alignment Length:345 Identity:90/345 - (26%)
Similarity:132/345 - (38%) Gaps:78/345 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CRVCLEELHPVTSIYSTDFAMMPSV--MLMQCAKIRVFKTDGLPSVICNNCIYRLGVAFHFKQEC 71
            |||||::...:..||.....|...:  :|..|..|:|.:.|..|..:|..|...|.:|..|::.|
  Fly    10 CRVCLKQDELLVDIYEIVEEMQVDLCTLLETCGGIKVDRRDVQPMYLCQECTNELLIAAKFRKIC 74

  Fly    72 ENSDLRLRQY---LGI-----LESWRQDAATNTDFVEKPLLPQRDSDEEEPVDAKVSKRRSRY-- 126
            ..|: :||..   :.|     |.|........:|::|:  |...:..|.||:.  ||:...::  
  Fly    75 VESE-KLRDMAPEINIDTAEPLASEEIIIIDPSDYIEQ--LSAVEDPENEPIG--VSRWNCQHCG 134

  Fly   127 ---------QRKPPEEH---------------KKRGPKPV--------PKMPHTCYECHKSFKCI 159
                     :|...|.|               .|.|...|        ||..|.|.||.|..:..
  Fly   135 AGFQLSEVLRRHIQEVHASITIIDCRERRRIFTKLGCYQVHNCSYAKTPKRGHKCLECGKCLQSA 199

  Fly   160 AQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHER----------------------------- 195
            :.|..|||.||.|.|:.|..|.:.|.....|:||:|                             
  Fly   200 SSLASHIRLHTDEWPFTCDQCAKAFRTNGALEVHQRRHKQVLQHKCLHCGRGFVESSNLRRHIVN 264

  Fly   196 THTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHH 260
            .||.::|..|.:..:.||.:...:.|.:.:.|.|...|....|.|...|.|..|...|||.:.|.
  Fly   265 RHTEERPHLCNVYQRSFSRVYMLELHLRTNTGERPYACQHRDKRFAQLGVLKIHERIHTGERLHR 329

  Fly   261 CDVCGKAFSRRRDMRTHKLK 280
            |.||.|.|:|...:|.|.|:
  Fly   330 CQVCEKPFTRAGQLRKHALR 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 22/72 (31%)
COG5048 146..>211 CDD:227381 24/93 (26%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
C2H2 Zn finger 177..197 CDD:275368 7/48 (15%)
zf-H2C2_2 189..213 CDD:404364 8/52 (15%)
C2H2 Zn finger 205..225 CDD:275368 4/19 (21%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:404364 11/24 (46%)
C2H2 Zn finger 261..282 CDD:275368 9/20 (45%)
C2H2 Zn finger 318..338 CDD:275368
CG7963NP_649798.3 zf-AD 10..80 CDD:285071 21/70 (30%)
C2H2 Zn finger 159..179 CDD:275368 3/19 (16%)
COG5048 184..>250 CDD:227381 21/65 (32%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..262 CDD:275368 0/16 (0%)
C2H2 Zn finger 274..294 CDD:275368 4/19 (21%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
zf-H2C2_2 315..339 CDD:290200 11/23 (48%)
C2H2 Zn finger 330..350 CDD:275368 9/20 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.