DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and CG11247

DIOPT Version :10

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:249 Identity:70/249 - (28%)
Similarity:112/249 - (44%) Gaps:26/249 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 RDS--DEEEPVDAKVSKRRSRYQRKPPEEHKKRGPKPVPKMPHTCYECHKSFKCIAQLTQHIRTH 169
            ||:  ||||....:...:...|.:...::..::| :||.:..|.|.:|.|.|.....|.:|:..|
  Fly    52 RDACVDEEEDDGGEQDSKDDDYVQPQLKKSARKG-EPVKRKHHVCSQCSKEFGGKTDLQRHMLIH 115

  Fly   170 TGEKPYQCSFCIQRFAQKYNLKVHERT-HTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVC 233
            :.|:|::|..|.:.:.|..|||.|..| |...|.|.|..|.|.|:.....:.|.::|.|.:...|
  Fly   116 SDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPC 180

  Fly   234 SLCQKGFYTAGDLSKHMITH--TGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDD 296
            .||.|.|...|.|.:||::|  |.|:..:|..|..:||...::|.| ::.|  |....|..    
  Fly   181 DLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVH-MERH--EQGMEHRC---- 238

  Fly   297 DDEAIDTDPVGLDTLDHAH----------FKCPDCDKAFDTADSLSLHFRTHAA 340
               :|..:....:....||          |:|..|.|..:..:.|:.|.:.|.|
  Fly   239 ---SICENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTA 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 23/65 (35%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
C2H2 Zn finger 177..197 CDD:275368 8/20 (40%)
zf-H2C2_2 189..213 CDD:463886 11/24 (46%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
zf-H2C2_2 245..270 CDD:463886 9/26 (35%)
C2H2 Zn finger 261..282 CDD:275368 6/20 (30%)
C2H2 Zn finger 318..338 CDD:275368 5/19 (26%)
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 51/168 (30%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
C2H2 Zn finger 123..144 CDD:275368 8/20 (40%)
C2H2 Zn finger 152..172 CDD:275368 5/19 (26%)
C2H2 Zn finger 180..200 CDD:275368 9/19 (47%)
COG5048 <192..369 CDD:227381 26/108 (24%)
C2H2 Zn finger 210..230 CDD:275370 6/20 (30%)
C2H2 Zn finger 238..260 CDD:275371 3/28 (11%)
C2H2 Zn finger 267..287 CDD:275368 5/19 (26%)
C2H2 Zn finger 295..315 CDD:275368
C2H2 Zn finger 323..343 CDD:275368
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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