DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and Neu2

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:345 Identity:98/345 - (28%)
Similarity:148/345 - (42%) Gaps:59/345 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 MLMQCAKIRVFKTDGLPSVICNNCIYRLGVAFHFKQECENSDLRLRQYLGILESWRQDAATN--T 96
            ::.:|...:|.|.|.|.:.||.:|:.....||...:..|.|    .|:...|:..|::.:.|  :
  Fly    18 IIYKCTGWQVEKHDPLSNTICKSCLEDAQNAFDIIETYERS----HQFYRFLKDVREEESENDGS 78

  Fly    97 DFVEKPLLPQRD-SDEEEPVDA----KVSKRRSRYQRKPPEEHKKRGPKPVPKMPHTCYECHKSF 156
            ...|:....:|| .|..:.||:    .:::...:.:.||               ..:|..|.|||
  Fly    79 GCSEEVEAAERDLQDGADDVDSGNEPDINECDIKAKEKP---------------GFSCSHCPKSF 128

  Fly   157 KCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAH 221
            :..:.|..|:|:||||:|:.||.|.:.|.....|:.|.|||||::||||..|.:.|:|..:.:||
  Fly   129 QVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAH 193

  Fly   222 QKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAFSRRRD----MRTHK---- 278
            .::|.......|..|||.|.|:..|.:|:.|||......|..|.|:|....:    ||.|:    
  Fly   194 IQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRVHQERLF 258

  Fly   279 --------------LKLHPLESSTNHDIVDDDDDEAIDTDPVGLDTLDHAH-FKCPDCDKAFDTA 328
                          ||.|   .|.|..........|       ..||.|:. .||..|.|.|...
  Fly   259 TCGHCSKDFALHAYLKRH---LSRNARCSQSSKASA-------HKTLGHSKALKCGKCPKTFTDR 313

  Fly   329 DSLSLHFRTHAANNNLLNLP 348
            .:||.|.::|..|..||..|
  Fly   314 SALSTHLKSHTKNKPLLEGP 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 12/45 (27%)
COG5048 146..>211 CDD:227381 29/64 (45%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
zf-H2C2_2 189..213 CDD:404364 12/23 (52%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
zf-H2C2_2 245..270 CDD:404364 9/24 (38%)
C2H2 Zn finger 261..282 CDD:275368 9/42 (21%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 13/48 (27%)
COG5048 <119..241 CDD:227381 48/121 (40%)
C2H2 Zn finger 121..141 CDD:275368 8/19 (42%)
zf-H2C2_2 133..158 CDD:290200 12/24 (50%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
zf-H2C2_2 162..185 CDD:290200 12/22 (55%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 8/19 (42%)
zf-C2H2_8 206..286 CDD:292531 22/82 (27%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..297 CDD:275368 8/46 (17%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446575
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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