DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and CG17385

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001286418.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster


Alignment Length:214 Identity:60/214 - (28%)
Similarity:90/214 - (42%) Gaps:55/214 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 PHTCYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSK 210
            |..|..|.|:|.....|.:|...|:||:|:.|:||.:.|.|:.|:|.|:.||||:|||:|:.|.:
  Fly    73 PFVCNICSKAFAQAVNLQRHYAVHSGERPFTCNFCNKSFTQQSNMKRHKMTHTGEKPFRCQRCGR 137

  Fly   211 QFSALGNFQAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGIKN----------------- 258
            .||.|.|.:.|:..||..:...|:.|:|||....:..:|:.:|  ||.                 
  Fly   138 YFSQLVNLKKHKLGHLNAKPYQCNYCEKGFTQLSNFKRHLQSH--IKEGVDVDVPASIQAAAALA 200

  Fly   259 ------------HHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDPVGLDTL 311
                        ..|.||...|....|...|:.|.|            :|.:.|    .:.::.:
  Fly   201 RERLESEQKPSFFECMVCRAIFDTFADYEKHEAKCH------------EDHERA----QLEVNQM 249

  Fly   312 DHAH--------FKCPDCD 322
            .|.|        |..||.|
  Fly   250 SHMHPDDYLPMKFAVPDLD 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 28/64 (44%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
C2H2 Zn finger 177..197 CDD:275368 8/19 (42%)
zf-H2C2_2 189..213 CDD:404364 12/23 (52%)
C2H2 Zn finger 205..225 CDD:275368 7/19 (37%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:404364 8/53 (15%)
C2H2 Zn finger 261..282 CDD:275368 7/20 (35%)
C2H2 Zn finger 318..338 CDD:275368 3/5 (60%)
CG17385NP_001286418.1 COG5048 <13..181 CDD:227381 42/109 (39%)
C2H2 Zn finger 18..39 CDD:275368
C2H2 Zn finger 48..68 CDD:275368
C2H2 Zn finger 76..96 CDD:275368 6/19 (32%)
C2H2 Zn finger 104..124 CDD:275368 8/19 (42%)
C2H2 Zn finger 132..148 CDD:275368 6/15 (40%)
C2H2 Zn finger 160..180 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449807
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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