DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and CG2202

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster


Alignment Length:363 Identity:92/363 - (25%)
Similarity:146/363 - (40%) Gaps:87/363 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 CNNCIYRLGVAFHFKQECENSDLRLRQYLGILESWRQDAATNTDFVEKPLLPQRDSDEEEP-VDA 117
            |.:|......:.|.|...::..........:.|:    |.:..|.:|:..:.:.:.:..|| .:.
  Fly   504 CPHCPKAFARSDHLKAHVQSLHSNKEHKCSLCEA----AFSRLDALERHKVSKHNGEGLEPGSEL 564

  Fly   118 KV----------SKRRS--RYQRKPPEEHKKRGPKPVPKMPHTCYECHKSFKCIAQLTQHIRTHT 170
            |:          |||.|  .|.||....|        ....:.|..|.::|:..|||.:|.:|||
  Fly   565 KLQLAEHTCEYCSKRFSSKTYLRKHTLLH--------TDFLYACKTCDETFRERAQLREHEKTHT 621

  Fly   171 GEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVCSL 235
            |::.:.|..|...||:...|:||.|.|.|:||::|..|.|.|....:.:.|::.|.|.:..:|:.
  Fly   622 GQRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRFCVKAFPRATDLKVHERYHTGTKPNLCNT 686

  Fly   236 CQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEA 300
            |.|.|:.|.:|:.||.||||.:.:.||.|.|:|::..|::.| ::.|..|               
  Fly   687 CGKSFHRAYNLTIHMRTHTGERPYKCDQCPKSFTQSNDLKAH-IRRHTGE--------------- 735

  Fly   301 IDTDPVGLDTLDHAHFKCPDCDKAFDTADSLSLH-FRTHAANNNLLNLPLPPAPPMSHHYHH--- 361
                          .:|||.||..|     |.|: .|.|.               ||.|..|   
  Fly   736 --------------RYKCPHCDAYF-----LQLYNMRNHC---------------MSAHNKHIET 766

  Fly   362 --DALHHLGPPNPATQMGMAAMAHMLAPPPPPPPTPSE 397
              ..|...|..:...|      :|:.....||...|:|
  Fly   767 KTGRLQRTGLLDDGGQ------SHLTTVVMPPARYPNE 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 4/25 (16%)
COG5048 146..>211 CDD:227381 25/64 (39%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
C2H2 Zn finger 177..197 CDD:275368 8/19 (42%)
zf-H2C2_2 189..213 CDD:404364 11/23 (48%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
zf-H2C2_2 245..270 CDD:404364 12/24 (50%)
C2H2 Zn finger 261..282 CDD:275368 7/20 (35%)
C2H2 Zn finger 318..338 CDD:275368 8/20 (40%)
CG2202NP_572657.2 zf-AD 45..121 CDD:285071
C2H2 Zn finger 150..171 CDD:275368
C2H2 Zn finger 192..213 CDD:275370
C2H2 Zn finger 221..239 CDD:275370
COG5048 <443..730 CDD:227381 68/238 (29%)
C2H2 Zn finger 476..496 CDD:275368
zf-H2C2_2 488..513 CDD:290200 2/8 (25%)
C2H2 Zn finger 504..525 CDD:275368 4/20 (20%)
C2H2 Zn finger 532..548 CDD:275368 4/19 (21%)
C2H2 Zn finger 573..593 CDD:275368 7/19 (37%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
zf-H2C2_2 613..637 CDD:290200 9/23 (39%)
C2H2 Zn finger 628..648 CDD:275368 8/19 (42%)
zf-H2C2_2 640..663 CDD:290200 11/22 (50%)
C2H2 Zn finger 656..676 CDD:275368 5/19 (26%)
C2H2 Zn finger 684..704 CDD:275368 8/19 (42%)
zf-C2H2 684..704 CDD:278523 8/19 (42%)
zf-H2C2_2 696..721 CDD:290200 12/24 (50%)
C2H2 Zn finger 712..732 CDD:275368 7/20 (35%)
C2H2 Zn finger 739..755 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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