DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and Zfp189

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001101400.1 Gene:Zfp189 / 313219 RGDID:1306510 Length:608 Species:Rattus norvegicus


Alignment Length:301 Identity:92/301 - (30%)
Similarity:134/301 - (44%) Gaps:49/301 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LGILESWRQDAATNTDFVEKPLLPQ-------RDSDEEEPVDA-------KVSKRRSRYQRKPP- 131
            |.:|.....:..|..:.:||.:.||       :...:::|:.:       ::.|:|..:..:.| 
  Rat    39 LDVLNRNEDEEPTVKEEIEKDIEPQGIIVTRIKSELDQDPMGSETFELVGRLDKQRGIFLWEIPR 103

  Fly   132 ----EEHKK-RGPKPVPKMP------HTCYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFA 185
                ||.|. ||...|.|.|      |.|.||.|.|...|...||.|.||||||:||:.|.:.|:
  Rat   104 DSLTEEQKMFRGHTNVRKRPNSEEKCHKCEECGKRFVRKAHFIQHQRVHTGEKPFQCNECGKSFS 168

  Fly   186 QKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHM 250
            :...:..|:|.|||::|::|..|.|.||.......||:||.|.|...|:.|::.|.....|.||.
  Rat   169 RSSFVIEHQRIHTGERPYECNYCGKTFSVSSTLIRHQRIHTGERPYQCNQCKQSFSQRRSLVKHQ 233

  Fly   251 ITHTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLES-----------STNHDIVDDDDDEAIDTD 304
            ..|||.|.|.|..||||||.:..:..|: :.|..|.           |.|..:|:..        
  Rat   234 RIHTGEKPHKCSDCGKAFSWKSHLIEHQ-RTHTGEKPYHCTKCKKSFSRNSLLVEHQ-------- 289

  Fly   305 PVGLDTLDHAHFKCPDCDKAFDTADSLSLHFRTHAANNNLL 345
              .:.|.:..| ||.:|.|||..:..|..|.:.|......|
  Rat   290 --RIHTGERPH-KCGECGKAFRLSTYLIQHQKIHTGEKPFL 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 29/70 (41%)
C2H2 Zn finger 149..169 CDD:275368 9/19 (47%)
C2H2 Zn finger 177..197 CDD:275368 5/19 (26%)
zf-H2C2_2 189..213 CDD:404364 9/23 (39%)
C2H2 Zn finger 205..225 CDD:275368 7/19 (37%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:404364 14/24 (58%)
C2H2 Zn finger 261..282 CDD:275368 8/20 (40%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
Zfp189NP_001101400.1 KRAB_A-box <10..39 CDD:143639 92/301 (31%)
COG5048 116..506 CDD:227381 76/224 (34%)
C2H2 Zn finger 132..152 CDD:275368 9/19 (47%)
zf-H2C2_2 144..169 CDD:290200 13/24 (54%)
C2H2 Zn finger 160..180 CDD:275368 5/19 (26%)
zf-H2C2_2 175..196 CDD:290200 9/20 (45%)
C2H2 Zn finger 188..208 CDD:275368 7/19 (37%)
zf-H2C2_2 201..225 CDD:290200 9/23 (39%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
zf-H2C2_2 228..252 CDD:290200 13/23 (57%)
C2H2 Zn finger 244..264 CDD:275368 8/20 (40%)
zf-H2C2_2 256..281 CDD:290200 3/25 (12%)
C2H2 Zn finger 272..292 CDD:275368 3/29 (10%)
zf-H2C2_2 285..307 CDD:290200 7/32 (22%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
zf-H2C2_2 312..337 CDD:290200 4/16 (25%)
C2H2 Zn finger 328..348 CDD:275368 92/301 (31%)
zf-H2C2_2 341..365 CDD:290200
C2H2 Zn finger 356..376 CDD:275368
zf-H2C2_2 368..393 CDD:290200
C2H2 Zn finger 384..404 CDD:275368
C2H2 Zn finger 440..460 CDD:275368
zf-H2C2_2 452..477 CDD:290200
C2H2 Zn finger 468..488 CDD:275368
zf-H2C2_2 481..505 CDD:290200
C2H2 Zn finger 496..516 CDD:275368
zf-H2C2_2 508..533 CDD:290200
C2H2 Zn finger 524..544 CDD:275368
zf-H2C2_2 537..561 CDD:290200
C2H2 Zn finger 552..572 CDD:275368
C2H2 Zn finger 583..603 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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