DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and blmp-1

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001251370.1 Gene:blmp-1 / 172917 WormBaseID:WBGene00003847 Length:817 Species:Caenorhabditis elegans


Alignment Length:294 Identity:78/294 - (26%)
Similarity:128/294 - (43%) Gaps:60/294 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 KMPHTCYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEIC 208
            |..:.|.:|:|:|..::.|..|:||||||:|::|..|.:.|.|..:|:.|...|||::|.:|:||
 Worm   505 KTRYACKDCNKTFGQLSNLKVHVRTHTGERPFKCEICTKEFTQLAHLQKHHLVHTGERPHRCDIC 569

  Fly   209 SKQFSALGNFQAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAFSRRRD 273
            .|:||:..|.:.|.::|.|.:...|.:|...|.....|..|...|...:.:.|..|||.:.....
 Worm   570 DKRFSSTSNLKTHLRLHNGQKPYTCDVCDAKFTQYVHLRLHKRLHANERPYSCGTCGKKYISPSG 634

  Fly   274 MRTH----KLKLHPLESSTNHDIVD---DDDDEAIDTDPVGLDTLDHAHFKCPDCDKAFDTADSL 331
            :|||    ..|...::.|...|::|   :.|:.::.....|                      :|
 Worm   635 LRTHWKTTTCKEEDMKDSMRDDLMDIKGEIDEGSMSGSGYG----------------------NL 677

  Fly   332 SLHFRTHAANNNLLNLPLPPAPPMSHHYH--HDALHHLGP--------PNPATQ----------M 376
            .:...|   .|:.|..||.|...:...|:  :.:|...||        |.|.:|          |
 Worm   678 GIFENT---LNSELKRPLMPIETIYSKYNLPNASLLGQGPSGMQEQQAPPPTSQQQQHMMYGNTM 739

  Fly   377 G-MAAMAHMLAPPPPPPPTPSEGRYTMLHHTAAQ 409
            | |...:|:..|||||       ::..:.|:..|
 Worm   740 GHMGQGSHLQGPPPPP-------QHFQMDHSGMQ 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 26/64 (41%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
zf-H2C2_2 189..213 CDD:404364 10/23 (43%)
C2H2 Zn finger 205..225 CDD:275368 8/19 (42%)
C2H2 Zn finger 233..253 CDD:275368 5/19 (26%)
zf-H2C2_2 245..270 CDD:404364 7/24 (29%)
C2H2 Zn finger 261..282 CDD:275368 8/24 (33%)
C2H2 Zn finger 318..338 CDD:275368 1/19 (5%)
blmp-1NP_001251370.1 SET 119..247 CDD:214614
zf-C2H2 508..530 CDD:278523 7/21 (33%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
zf-H2C2_2 522..547 CDD:290200 12/24 (50%)
C2H2 Zn finger 538..558 CDD:275368 6/19 (32%)
zf-H2C2_2 550..575 CDD:290200 11/24 (46%)
C2H2 Zn finger 566..586 CDD:275368 8/19 (42%)
zf-H2C2_2 578..603 CDD:290200 7/24 (29%)
C2H2 Zn finger 594..614 CDD:275368 5/19 (26%)
zf-H2C2_2 606..631 CDD:290200 7/24 (29%)
ARS2 <620..772 CDD:282772 38/179 (21%)
C2H2 Zn finger 622..641 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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