Sequence 1: | NP_609786.2 | Gene: | CG17328 / 34962 | FlyBaseID: | FBgn0028895 | Length: | 413 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491997.1 | Gene: | sem-4 / 172435 | WormBaseID: | WBGene00004773 | Length: | 744 | Species: | Caenorhabditis elegans |
Alignment Length: | 507 | Identity: | 103/507 - (20%) |
---|---|---|---|
Similarity: | 156/507 - (30%) | Gaps: | 181/507 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 CRVCLEELHPVTSIYSTDFAMMPSVMLMQCAKIRVFKTDG-----LPSVIC------NNCIY--- 59
Fly 60 --RLGVAFHFKQECENSDLRL-------RQYLGILESWRQDAAT-----NTDF------------ 98
Fly 99 --VEKPLLPQRD---------------------SDEEEPVDAKVSKRRSRYQRKPPEEHKKRGPK 140
Fly 141 PVPKM-PHTCYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPFQ 204
Fly 205 CEICS--KQFSALGNFQAH----QKIHLG----------------VRDQVCSLCQKGFYTAGDLS 247
Fly 248 KHMITHTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDPVGLDTLD 312
Fly 313 HAHFKCPDCDKAFDTADSLSLHFRTHAANN----------------NLLNLPLPPAPPMSHHYHH 361
Fly 362 DALHH--------------------LGPPNPATQMGMAAMAHMLAPPPPPPP 393 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG17328 | NP_609786.2 | zf-AD | 8..80 | CDD:214871 | 15/93 (16%) |
COG5048 | 146..>211 | CDD:227381 | 24/66 (36%) | ||
C2H2 Zn finger | 149..169 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 177..197 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 189..213 | CDD:404364 | 8/25 (32%) | ||
C2H2 Zn finger | 205..225 | CDD:275368 | 5/25 (20%) | ||
C2H2 Zn finger | 233..253 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 245..270 | CDD:404364 | 3/24 (13%) | ||
C2H2 Zn finger | 261..282 | CDD:275368 | 2/20 (10%) | ||
C2H2 Zn finger | 318..338 | CDD:275368 | 5/19 (26%) | ||
sem-4 | NP_491997.1 | C2H2 Zn finger | 307..327 | CDD:275368 | 6/19 (32%) |
zf-H2C2_2 | 319..344 | CDD:290200 | 12/24 (50%) | ||
C2H2 Zn finger | 335..355 | CDD:275368 | 8/19 (42%) | ||
lambda-1 | 553..>610 | CDD:212564 | 11/28 (39%) | ||
zf-C2H2 | 589..611 | CDD:278523 | |||
C2H2 Zn finger | 591..611 | CDD:275368 | |||
zf-H2C2_2 | 603..628 | CDD:290200 | |||
C2H2 Zn finger | 619..639 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S2971 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.950 |