DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17328 and LOC108183935

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_017211249.1 Gene:LOC108183935 / 108183935 -ID:- Length:358 Species:Danio rerio


Alignment Length:317 Identity:89/317 - (28%)
Similarity:129/317 - (40%) Gaps:55/317 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ENSDLRLRQYLGILESWRQDAATNTDFV----------EKPLLPQRDSDEEEPVDAKVSKRRSRY 126
            |:.|:::.:...:.:   :|....||.:          |...:.|..:.:|:|...|.:..|.|:
Zfish     7 ESEDVKIEETFTVKQ---EDLQEQTDLMLLKEKTHQQNEMEEIQQDMTTDEKPTLTKKTLSRGRH 68

  Fly   127 QRKPPEEHKKRGPKPVPKMPHTCYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLK 191
            :            |..|....:|.:|.|||....:|..|||.||.||.|.|..|.:.|....||.
Zfish    69 R------------KSKPSCNFSCKQCGKSFSQKPKLDVHIRDHTREKAYTCKQCGKSFYNTRNLT 121

  Fly   192 VHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGI 256
            ||.|.|||::|:.|:.|.|.|...||...|.:||.|.|...|..|.|.|.|.|:|:.||..|||.
Zfish   122 VHMRIHTGERPYTCQQCGKSFHKTGNLTVHMRIHTGERPYTCQQCGKSFQTTGNLTVHMRIHTGE 186

  Fly   257 KNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDPVGLDTLDHAHFKCPDC 321
            |.:.|..|||::::..::..| ::.|.                       |..|     |.|..|
Zfish   187 KPYSCPQCGKSYNQNSNLEVH-MRTHN-----------------------GGRT-----FVCTQC 222

  Fly   322 DKAFDTADSLSLHFRTHAANNNLLNLPLPPAPPMSHHYHHDALHHLG-PPNPATQMG 377
            .|:|....:|.||.|.|.............:.|......|..:.|.| .|....|.|
Zfish   223 GKSFAQKQNLDLHMRIHTGEKPYTCTECGKSFPYKSTLKHHMIVHTGEKPFACAQCG 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 2/7 (29%)
COG5048 146..>211 CDD:227381 28/64 (44%)
C2H2 Zn finger 149..169 CDD:275368 9/19 (47%)
C2H2 Zn finger 177..197 CDD:275368 8/19 (42%)
zf-H2C2_2 189..213 CDD:404364 12/23 (52%)
C2H2 Zn finger 205..225 CDD:275368 7/19 (37%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
zf-H2C2_2 245..270 CDD:404364 11/24 (46%)
C2H2 Zn finger 261..282 CDD:275368 5/20 (25%)
C2H2 Zn finger 318..338 CDD:275368 8/19 (42%)
LOC108183935XP_017211249.1 C2H2 Zn finger 79..99 CDD:275368 9/19 (47%)
C2H2 Zn finger 107..127 CDD:275368 8/19 (42%)
zf-H2C2_2 119..144 CDD:316026 13/24 (54%)
C2H2 Zn finger 135..155 CDD:275368 7/19 (37%)
zf-H2C2_2 147..170 CDD:316026 9/22 (41%)
C2H2 Zn finger 163..183 CDD:275368 9/19 (47%)
COG5048 <187..346 CDD:227381 26/122 (21%)
C2H2 Zn finger 191..211 CDD:275368 5/20 (25%)
C2H2 Zn finger 219..239 CDD:275368 8/19 (42%)
C2H2 Zn finger 247..267 CDD:275368 2/19 (11%)
C2H2 Zn finger 275..295 CDD:275368 2/5 (40%)
C2H2 Zn finger 303..323 CDD:275368
C2H2 Zn finger 330..350 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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