DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17328 and LOC101732880

DIOPT Version :10

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_031757797.1 Gene:LOC101732880 / 101732880 XenbaseID:XB-GENE-29086535 Length:535 Species:Xenopus tropicalis


Alignment Length:306 Identity:90/306 - (29%)
Similarity:117/306 - (38%) Gaps:82/306 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 CNNCIYRLGVAFHFKQECENSDLRLRQYLGILESWRQDAATNTDFVEKPL--------------- 103
            ||.|        |....| |.||.:.|        |...|      |||.               
 Frog   289 CNEC--------HVCFIC-NKDLEIHQ--------RNHRA------EKPFSCSECGKCFANRSTL 330

  Fly   104 -LPQRDSDEEEPV----DAKVSKRRSR-YQRKPPEEHKKRGPKPVPKMPHTCYECHKSFKCIAQL 162
             ..||....|:|.    .||..:.||. :..:  ..||.       :.|.:|.||.|.|...:.|
 Frog   331 GAHQRIHTGEKPYVCPECAKCFRSRSHLFSHR--NSHKS-------EKPFSCSECGKRFGSRSHL 386

  Fly   163 TQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLG 227
            ..|..:||.|||:.|..|.:.|..|..|..|.|.|||:|||.|..|.|.|:...:...|.::|.|
 Frog   387 VSHQISHTEEKPFSCPVCEKCFKSKPQLTEHYRIHTGEKPFSCSTCGKSFTQRSHLIGHVRLHTG 451

  Fly   228 VRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDI 292
            .|...||.|.|.|....||:|||..|:|.|...|:.|||:|..:..::.|.| :|..|..     
 Frog   452 ERPFSCSECGKSFGLQRDLNKHMKFHSGEKPFTCNECGKSFLLQGHLKRHFL-IHTGEKP----- 510

  Fly   293 VDDDDDEAIDTDPVGLDTLDHAHFKCPDCDKAFDTADSLSLHFRTH 338
                                   |.|..|:|.|....:|:.|||.|
 Frog   511 -----------------------FSCSICEKRFGLQSNLNRHFRIH 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 8/25 (32%)
COG5048 146..>211 CDD:227381 28/64 (44%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
zf-H2C2_2 189..213 CDD:463886 12/23 (52%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
C2H2 Zn finger 233..253 CDD:275368 10/19 (53%)
zf-H2C2_2 245..270 CDD:463886 13/24 (54%)
C2H2 Zn finger 261..282 CDD:275368 7/20 (35%)
C2H2 Zn finger 318..338 CDD:275368 8/19 (42%)
LOC101732880XP_031757797.1 KRAB_A-box 110..141 CDD:470626
C2H2 Zn finger 289..309 CDD:275368 10/36 (28%)
COG5048 <313..473 CDD:227381 53/168 (32%)
C2H2 Zn finger 317..337 CDD:275368 2/19 (11%)
C2H2 Zn finger 345..365 CDD:275368 4/21 (19%)
C2H2 Zn finger 373..393 CDD:275368 7/19 (37%)
C2H2 Zn finger 401..421 CDD:275368 7/19 (37%)
C2H2 Zn finger 429..449 CDD:275368 5/19 (26%)
C2H2 Zn finger 457..477 CDD:275368 10/19 (53%)
COG5048 481..>535 CDD:227381 20/82 (24%)
C2H2 Zn finger 485..505 CDD:275368 7/20 (35%)
C2H2 Zn finger 513..533 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.