DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17328 and zbtb49

DIOPT Version :9

Sequence 1:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001076468.1 Gene:zbtb49 / 100009630 ZFINID:ZDB-GENE-070209-170 Length:524 Species:Danio rerio


Alignment Length:238 Identity:75/238 - (31%)
Similarity:109/238 - (45%) Gaps:50/238 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 EPVDAKVSKRRSRYQRKPPEEHKKRGPKPVPKM---------PHTCYECHKSFKCIAQLTQHIRT 168
            :|.:|      :..:|.|..|....||:...:.         .:.|..|.|:||..:.|..|.|:
Zfish   243 DPAEA------AELERTPEAEPGNTGPQGQEQRSGVSGGGGNKYCCEVCGKTFKHPSNLELHKRS 301

  Fly   169 HTGEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVC 233
            ||||||:|||.|.:.|:|..||:.|.|.|:|:||:.||:|.|.|:|.|:.|.|..||.|.|..:|
Zfish   302 HTGEKPFQCSVCGKAFSQAGNLQTHLRRHSGEKPYICELCGKSFAASGDVQRHIIIHSGARPHLC 366

  Fly   234 SLCQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDD 298
            .:|.:||....:|.:|..||...:...||.|||:|:.:|.:..||.:                  
Zfish   367 DVCGRGFSNFSNLKEHKKTHRAEREFTCDQCGKSFNMQRKLLKHKSR------------------ 413

  Fly   299 EAIDTDPVGLDTLDHAHFK---CPDCDKAFDTADSLSLHFRTH 338
                          |:..|   |..|.|.|..:..|..|.|:|
Zfish   414 --------------HSGDKPYCCQTCGKCFAGSGDLQRHVRSH 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 31/64 (48%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
C2H2 Zn finger 177..197 CDD:275368 9/19 (47%)
zf-H2C2_2 189..213 CDD:404364 12/23 (52%)
C2H2 Zn finger 205..225 CDD:275368 9/19 (47%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:404364 10/24 (42%)
C2H2 Zn finger 261..282 CDD:275368 9/20 (45%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
zbtb49NP_001076468.1 zf-H2C2_2 322..346 CDD:290200 12/23 (52%)
C2H2 Zn finger 338..358 CDD:275368 9/19 (47%)
C2H2 Zn finger 366..386 CDD:275368 6/19 (32%)
zf-H2C2_2 378..402 CDD:290200 9/23 (39%)
C2H2 Zn finger 394..414 CDD:275368 9/51 (18%)
zf-H2C2_2 407..430 CDD:290200 7/54 (13%)
C2H2 Zn finger 422..442 CDD:275368 7/19 (37%)
zf-H2C2_2 434..459 CDD:290200 4/9 (44%)
C2H2 Zn finger 450..467 CDD:275368
BTB 15..118 CDD:279045
BTB 26..118 CDD:197585
zf-C2H2 280..302 CDD:278523 8/21 (38%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
COG5048 <292..466 CDD:227381 63/183 (34%)
zf-H2C2_2 294..319 CDD:290200 14/24 (58%)
C2H2 Zn finger 310..330 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.