DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17329 and AT5G37200

DIOPT Version :9

Sequence 1:NP_609784.2 Gene:CG17329 / 34958 FlyBaseID:FBgn0028896 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_198536.1 Gene:AT5G37200 / 833694 AraportID:AT5G37200 Length:217 Species:Arabidopsis thaliana


Alignment Length:102 Identity:25/102 - (24%)
Similarity:43/102 - (42%) Gaps:17/102 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QRRRILRLLQGKMLQYATLEERLHRIGELVLIAELHSGVKTLNQRL---DRMVENSTCSICLLPW 107
            :.||::......:|......|..||:.|              .||:   |...|:.|||||:..:
plant   116 KERRVIFPHGPSLLSRGASGEVFHRLVE--------------EQRVESADLEEEDETCSICIEKF 166

  Fly   108 TDNGIHRLVSLRCGHLFGSSCIHMAIRRNHRCPICRR 144
            :::....:....|.|||...|:...:...:.||:||:
plant   167 SESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLCRK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17329NP_609784.2 zf-RING_2 99..143 CDD:290367 12/43 (28%)
AT5G37200NP_198536.1 zf-rbx1 <155..202 CDD:289448 13/46 (28%)
zf-RING_2 157..202 CDD:290367 12/44 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I2695
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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