DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17329 and rnf4

DIOPT Version :9

Sequence 1:NP_609784.2 Gene:CG17329 / 34958 FlyBaseID:FBgn0028896 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_001373177.1 Gene:rnf4 / 557319 ZFINID:ZDB-GENE-041008-246 Length:184 Species:Danio rerio


Alignment Length:60 Identity:23/60 - (38%)
Similarity:35/60 - (58%) Gaps:4/60 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 TCSICLLPWT---DNGIHRLVSLRCGHLFGSSCIHMAIRRNHRCPICRRRARHFHVRRIY 155
            :|.:|:..::   |:| ..:||.:|||||.|.||..::.|.|.||.||::..|.....||
Zfish   125 SCPVCMDVYSEIMDSG-RLMVSTKCGHLFCSQCIRDSLSRAHSCPTCRKKLTHKQYHPIY 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17329NP_609784.2 zf-RING_2 99..143 CDD:290367 18/46 (39%)
rnf4NP_001373177.1 RING-HC_RNF4 121..174 CDD:319447 20/49 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001208
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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