DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17329 and rnf4

DIOPT Version :9

Sequence 1:NP_609784.2 Gene:CG17329 / 34958 FlyBaseID:FBgn0028896 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_001016554.1 Gene:rnf4 / 549308 XenbaseID:XB-GENE-1016982 Length:188 Species:Xenopus tropicalis


Alignment Length:163 Identity:40/163 - (24%)
Similarity:66/163 - (40%) Gaps:25/163 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ELERTEQQQQ---EPTEPSNGNLEEQVRKLRDHNLRVKHLNTQRRRILRLLQGKMLQYATLEERL 68
            |||..|:...   |.|||...:|......:.|..:.|:....|||.:.|..|.......:.::..
 Frog    36 ELESGEEVVDLTCESTEPVVVDLTNNDLSINDSVVIVEDTPRQRRALSRPSQQTTSCVLSSDDED 100

  Fly    69 HRIGELVLIAELHSGVKTLNQRLDRMVENS--------TCSICLLPWTD---NGIHRLVSLRCGH 122
            .|          |:.....|:.:......|        :|.||:..:::   :| ..:||.:|||
 Frog   101 SR----------HADHFAANKDISSQAYGSSRSSSGKVSCPICMDSYSEIVQSG-RLIVSTKCGH 154

  Fly   123 LFGSSCIHMAIRRNHRCPICRRRARHFHVRRIY 155
            :|.|.|:..|::....||.||::..|.....||
 Frog   155 IFCSQCLRDALKNAPSCPTCRKKLNHKQYHPIY 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17329NP_609784.2 zf-RING_2 99..143 CDD:290367 15/46 (33%)
rnf4NP_001016554.1 zf-RING_2 129..175 CDD:290367 15/46 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001208
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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