Protein Alignment CG17329 and rnf4

DIOPT Version :10

• Sequence 1: NP_609784.2
• Gene: CG17329 / 34958
• FlyBaseID: FBgn0028896
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_001016554.1
• Gene: rnf4 / 549308
• XenbaseID: XB-GENE-1016982
• Length: 188
• Species: Xenopus tropicalis
• Alignment Length: 163
• Identity: 40/163 - (24%)
• Similarity: 66/163 - (40%)
• Gaps: 25/163 - (15%)

  Fly     7 ELERTEQQQQ---EPTEPSNGNLEEQVRKLRDHNLRVKHLNTQRRRILRLLQGKMLQYATLEERL 68
            |||..|:...   |.|||...:|......:.|..:.|:....|||.:.|..|.......:.::..
 Frog    36 ELESGEEVVDLTCESTEPVVVDLTNNDLSINDSVVIVEDTPRQRRALSRPSQQTTSCVLSSDDED 100

  Fly    69 HRIGELVLIAELHSGVKTLNQRLDRMVENS--------TCSICLLPWTD---NGIHRLVSLRCGH 122
            .|          |:.....|:.:......|        :|.||:..:::   :| ..:||.:|||
 Frog   101 SR----------HADHFAANKDISSQAYGSSRSSSGKVSCPICMDSYSEIVQSG-RLIVSTKCGH 154

  Fly   123 LFGSSCIHMAIRRNHRCPICRRRARHFHVRRIY 155
            :|.|.|:..|::....||.||::..|.....||
 Frog   155 IFCSQCLRDALKNAPSCPTCRKKLNHKQYHPIY 187

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG17329	NP_609784.2	HRD1	<36..>144	CDD:227568	26/118 (22%)
		RING_Ubox	96..155	CDD:473075	19/69 (28%)
rnf4	NP_001016554.1	RING-HC_RNF4	126..181	CDD:438195	17/55 (31%)