DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17329 and Rnf128

DIOPT Version :9

Sequence 1:NP_609784.2 Gene:CG17329 / 34958 FlyBaseID:FBgn0028896 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_001166820.1 Gene:Rnf128 / 315911 RGDID:1566282 Length:428 Species:Rattus norvegicus


Alignment Length:98 Identity:24/98 - (24%)
Similarity:45/98 - (45%) Gaps:22/98 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 KMLQYATLEERLHR---------IGELVLIAELHSGVKTLNQRLDRMV--ENSTCSICLLPWTDN 110
            :.|:.|..:.|..|         ||.|.|        :||.|. |:.:  :..:|::|:..:..|
  Rat   232 RRLRNARAQSRKQRQLKADAKKAIGRLQL--------RTLKQG-DKEIGPDGDSCAVCIELYKPN 287

  Fly   111 GIHRLVSLRCGHLFGSSCIHMAIRRNHRCPICR 143
            .:.|:  |.|.|:|..:|:...:..:..||:|:
  Rat   288 DVVRI--LTCNHIFHKTCVDPWLLEHRTCPMCK 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17329NP_609784.2 zf-RING_2 99..143 CDD:290367 11/43 (26%)
Rnf128NP_001166820.1 PA_GRAIL_like 48..193 CDD:239037
zf-RING_2 275..318 CDD:290367 11/44 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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