DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17329 and Rfwd3

DIOPT Version :9

Sequence 1:NP_609784.2 Gene:CG17329 / 34958 FlyBaseID:FBgn0028896 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_666330.2 Gene:Rfwd3 / 234736 MGIID:2384584 Length:774 Species:Mus musculus


Alignment Length:64 Identity:29/64 - (45%)
Similarity:42/64 - (65%) Gaps:1/64 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ENSTCSICLLPWTDNGIHRLVSLRCGHLFGSSCIHMAIR-RNHRCPICRRRARHFHVRRIYSPS 158
            |..||:|||..||:.|.||:.:||||||||..||...:: :..:||.|.::|:|..:..||:.|
Mouse   284 EGETCTICLEQWTNAGDHRISALRCGHLFGFRCISKWLKGQTRKCPQCNKKAKHSDIVVIYARS 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17329NP_609784.2 zf-RING_2 99..143 CDD:290367 22/44 (50%)
Rfwd3NP_666330.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..126
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..281
RING 287..334 CDD:238093 23/46 (50%)
WD40 451..>571 CDD:295369
WD40 <486..>626 CDD:225201
WD 1 493..535
WD40 repeat 501..537 CDD:293791
WD 2 536..568
WD40 repeat 542..582 CDD:293791
WD 3 583..628
WD40 repeat 590..644 CDD:293791
WD40 repeat 701..741 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836267
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7722
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5303
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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