DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17329 and rfwd3

DIOPT Version :10

Sequence 1:NP_609784.2 Gene:CG17329 / 34958 FlyBaseID:FBgn0028896 Length:162 Species:Drosophila melanogaster
Sequence 2:XP_002667008.1 Gene:rfwd3 / 100329327 ZFINID:ZDB-GENE-120529-1 Length:632 Species:Danio rerio


Alignment Length:62 Identity:27/62 - (43%)
Similarity:37/62 - (59%) Gaps:1/62 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ENSTCSICLLPWTDNGIHRLVSLRCGHLFGSSCIHMAIR-RNHRCPICRRRARHFHVRRIYS 156
            |..:||||..|||..|.|||.:||||||||..||...:. ..::||.|.:.|:...:..:|:
Zfish   147 EGESCSICFEPWTTAGEHRLAALRCGHLFGYVCISRWLTGGGNKCPQCNKPAKKTQIIFLYA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17329NP_609784.2 HRD1 <36..>144 CDD:227568 25/48 (52%)
RING_Ubox 96..155 CDD:473075 26/59 (44%)
rfwd3XP_002667008.1 mRING-C3HGC3_RFWD3 147..207 CDD:438114 26/59 (44%)
WD40 337..>458 CDD:475233
WD40 repeat 356..393 CDD:293791
WD40 repeat 399..440 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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