DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crp and Tfap4

DIOPT Version :9

Sequence 1:NP_001285976.1 Gene:crp / 34956 FlyBaseID:FBgn0001994 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_112459.1 Gene:Tfap4 / 83383 MGIID:103239 Length:338 Species:Mus musculus


Alignment Length:380 Identity:103/380 - (27%)
Similarity:158/380 - (41%) Gaps:142/380 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 DSEKRMRREIANSNERRRMQSINAGFQSLRSLLPRHEGEKLSKAAILQQTFQYIVELENQKTQLL 155
            |.|:|:|||||||||||||||||||||||::|:|..:|||||||||||||.:||..||.:||:||
Mouse    43 DQERRIRREIANSNERRRMQSINAGFQSLKTLIPHTDGEKLSKAAILQQTAEYIFSLEQEKTRLL 107

  Fly   156 TQNSELKRQVGEHEAGGSGDGGGTNSGGNYNDSNASGGNSTAVAIKKRKLTDNVINIQAISDSSD 220
            .||::|||.:  .|..||..                         |:|:..|           .|
Mouse   108 QQNTQLKRFI--QELSGSSP-------------------------KRRRAED-----------KD 134

  Fly   221 EGLGSMSPEPMTLLTAGGAAATKLSNAATLLAAKELHESKKQLEKERSLRRLLEDELQMIKRQLY 285
            ||:|  ||:           ..:...|..|  .:|:.|.::||:||||:|.:||::::.::..:|
Mouse   135 EGIG--SPD-----------IWEDEKAEDL--RREMIELRQQLDKERSVRMMLEEQVRSLEAHMY 184

  Fly   286 SVATAPPGTAVAAASGGSSGAYIPREVIEHTDNFVRSEDLEELGGTVSYVEIDEMTGQQQVVVCS 350
            .                                       |:|......|::.:...|.:::...
Mouse   185 P---------------------------------------EKLKVIAQQVQLQQQQEQVRLLHQE 210

  Fly   351 SIEELEADAAAEIITED-QVHEEVILSSNSSTESENEVNVNAIAKAYAEGCTSSAAMLQPILQAA 414
            .:|..:.....:::... ..|...::....:..|.:.:||..:..:......|::          
Mouse   211 KLEREQQHLRTQLLPPPAPTHHPTVIVPAPAPPSSHHINVVTMGPSSVINSVSTS---------- 265

  Fly   415 IKATPKVEVERIHEKIVKVKTEKHDLPSMQTAPHYQHSHRQNLETIVQAIRHLEG 469
                                                   ||||:||||||:|:||
Mouse   266 ---------------------------------------RQNLDTIVQAIQHIEG 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crpNP_001285976.1 HLH 97..148 CDD:278439 40/50 (80%)
Tfap4NP_112459.1 HLH 49..100 CDD:278439 40/50 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848577
Domainoid 1 1.000 82 1.000 Domainoid score I8465
eggNOG 1 0.900 - - E1_KOG0561
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 150 1.000 Inparanoid score I4359
Isobase 1 0.950 - 0 Normalized mean entropy S6439
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006895
OrthoInspector 1 1.000 - - oto94693
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15741
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5304
SonicParanoid 1 1.000 - - X5799
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

Return to query results.
Submit another query.