DRSC/TRiP Functional Genomics Resources

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Protein Alignment crp and MYC4

DIOPT Version :9

Sequence 1:NP_001285976.1 Gene:crp / 34956 FlyBaseID:FBgn0001994 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_193522.1 Gene:MYC4 / 827511 AraportID:AT4G17880 Length:589 Species:Arabidopsis thaliana


Alignment Length:187 Identity:42/187 - (22%)
Similarity:79/187 - (42%) Gaps:40/187 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PVAIKTEEVILEHAEYNSAEELDEELQLQLEDSGGENYHIEFAS----ESAHQGSQRRQSSMSGT 65
            |..:|:.|::.......:.:|.|...:.:...|..|...:.|.|    :|.|...:...:..:.:
plant   325 PKVLKSCEMVNFKNGIENGQEEDSSNKKRSPVSNNEEGMLSFTSVLPCDSNHSDLEASVAKEAES 389

  Fly    66 NTSKGGGGGGSGALSDGDGSGKPLVDSEKRMR---REIANSN---------ERRRMQSINAGFQS 118
            |                    :.:|:.||:.|   |:.||..         ||:|.:.:|..|.|
plant   390 N--------------------RVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYS 434

  Fly   119 LRSLLPRHEGEKLSKAAILQQTFQYIVELENQKTQLLTQNSELKRQVG--EHEAGGS 173
            ||:::|  ...|:.||::|.....||.||:::..:..:...||::|:.  ..|||.:
plant   435 LRAVVP--NVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNA 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crpNP_001285976.1 HLH 97..148 CDD:278439 20/62 (32%)
MYC4NP_193522.1 bHLH-MYC_N 63..250 CDD:290915
HLH 415..466 CDD:238036 17/52 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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