DRSC/TRiP Functional Genomics Resources

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Protein Alignment crp and bHLH39

DIOPT Version :9

Sequence 1:NP_001285976.1 Gene:crp / 34956 FlyBaseID:FBgn0001994 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_191257.1 Gene:bHLH39 / 824865 AraportID:AT3G56980 Length:258 Species:Arabidopsis thaliana


Alignment Length:218 Identity:50/218 - (22%)
Similarity:88/218 - (40%) Gaps:64/218 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EHAEYNSAEELDEELQLQLEDSGGENYHIEFASESAHQGSQRRQSSMSGTNTSKGGGGGGSGALS 80
            |:..|..|.::       |.:.|..::.:...:..|.....:.|:|...:.:|:|          
plant    19 EYDSYYLAGDI-------LNNGGFLDFPVPEETYGAVTAVTQHQNSFGVSVSSEG---------- 66

  Fly    81 DGDGSGKPLVDSEKRMRREIANSNERRRMQSINAGFQSLRSLLPRH-EGEKLSKAAILQQTFQYI 144
             .:....|:|  .|::..   |::||.|.:.||:.|.||||.||.. :.:|||..|.:.::.:||
plant    67 -NEIDNNPVV--VKKLNH---NASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYI 125

  Fly   145 VELENQKTQLLTQNSELKRQVGEHEAGGSGDGGGTNSGGNYNDSNASGGNSTAVAIKK------- 202
            .||:.|..:|:.:..||..|:                         ||..:|...:|:       
plant   126 PELQEQVKKLIKKKEELLVQI-------------------------SGQRNTECYVKQPPKAVAN 165

  Fly   203 -------RKLTDNVINIQAISDS 218
                   .:|.||.:.:| ||.|
plant   166 YISTVSATRLGDNEVMVQ-ISSS 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crpNP_001285976.1 HLH 97..148 CDD:278439 20/51 (39%)
bHLH39NP_191257.1 bHLH_AtORG2_like 77..153 CDD:381484 29/103 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 40 1.000 Domainoid score I4835
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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