DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crp and mxl-2

DIOPT Version :10

Sequence 1:NP_476605.1 Gene:crp / 34956 FlyBaseID:FBgn0001994 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_497173.1 Gene:mxl-2 / 175184 WormBaseID:WBGene00003510 Length:205 Species:Caenorhabditis elegans


Alignment Length:130 Identity:36/130 - (27%)
Similarity:54/130 - (41%) Gaps:29/130 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SSMSGTNTSKGGGGGGSGALSDGDGSGKPLVDSEKRMRREIANSNERRRMQSINAGFQSLRSLLP 124
            ||.|..||.....||.|.             |.:|......    ||:|.::||:|:..|:.|:|
 Worm    28 SSPSAPNTPATNSGGFSS-------------DRKKATHLRC----ERQRREAINSGYSDLKDLIP 75

  Fly   125 RHE---GEKLSKAAILQQTFQYIVEL-------ENQKTQLLTQNSELKRQVGEHE--AGGSGDGG 177
            :..   |.|.:.||||.:...::.:|       :.|..||..|.:.|:....|:|  |....|.|
 Worm    76 QTTTSLGCKTTNAAILFRACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAG 140

  Fly   178  177
             Worm   141  140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crpNP_476605.1 bHLHzip_TFAP4 94..154 CDD:381425 18/69 (26%)
mxl-2NP_497173.1 bHLHzip_Mlx_like 47..110 CDD:381410 17/66 (26%)

Return to query results.
Submit another query.