DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4935 and WDR83

DIOPT Version :9

Sequence 1:NP_609782.2 Gene:CG4935 / 34955 FlyBaseID:FBgn0028897 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001093207.1 Gene:WDR83 / 84292 HGNCID:32672 Length:315 Species:Homo sapiens


Alignment Length:288 Identity:138/288 - (47%)
Similarity:193/288 - (67%) Gaps:3/288 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PEFENFNVKTTIDCKQGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAA 66
            ||.....:| |:||.||||||||:||||.|||:|||||.:|||||..|.||:||.||..||.|||
Human    11 PELPQKRLK-TLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAA 74

  Fly    67 GSCDSSYIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIR 131
            ||.|:|.:.|...||:::.|||::|..||:.|.|||.|..|.|||::::.:||..|:::.|||.|
Human    75 GSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCR 139

  Fly   132 TRRLDPVQVMKEARDCITTVATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITYLAQTRDEQ 196
            :||.:|||.:.||||.:::|..:::.|.|.|:||.||.||:|:|:|..|.:|.|||....:||.|
Human   140 SRRPEPVQTLDEARDGVSSVKVSDHEILAGSVDGRVRRYDLRMGQLFSDYVGSPITCTCFSRDGQ 204

  Fly   197 CLVAGCQDSVVRLLDCETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDLLDGKV 261
            |.:....||.:||||.:||.||.||:||:..:|.::|.:...|..:|:.|.||..|.:||::|.:
Human   205 CTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGAL 269

  Fly   262 LQRIRISDNGGVVHSLATHPKRQEMLFA 289
            ...:.:  ..|||.|||.||....:|.|
Human   270 ALALPV--GSGVVQSLAYHPTEPCLLTA 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4935NP_609782.2 WD40 10..>302 CDD:225201 136/280 (49%)
WD40 10..281 CDD:238121 132/270 (49%)
WD40 repeat 21..57 CDD:293791 26/35 (74%)
WD40 repeat 62..98 CDD:293791 17/35 (49%)
WD40 repeat 105..135 CDD:293791 12/29 (41%)
WD40 repeat 140..178 CDD:293791 16/37 (43%)
WD40 repeat 186..222 CDD:293791 17/35 (49%)
WD40 repeat 229..254 CDD:293791 8/24 (33%)
WDR83NP_001093207.1 WD40 18..295 CDD:238121 135/279 (48%)
WD 1 23..62 29/38 (76%)
WD40 repeat 30..65 CDD:293791 25/34 (74%)
WD 2 65..104 19/38 (50%)
WD40 repeat 71..107 CDD:293791 16/35 (46%)
WD 3 107..146 17/38 (45%)
WD40 repeat 112..150 CDD:293791 17/37 (46%)
WD 4 151..188 17/36 (47%)
WD40 repeat 157..187 CDD:293791 13/29 (45%)
WD 5 190..228 18/37 (49%)
WD40 repeat 194..230 CDD:293791 17/35 (49%)
WD 6 231..272 13/40 (33%)
WD40 repeat 238..272 CDD:293791 10/33 (30%)
WD 7 275..313 10/23 (43%)
WD40 repeat 279..303 CDD:293791 9/17 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0316
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12194
Inparanoid 1 1.050 285 1.000 Inparanoid score I2863
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54396
OrthoDB 1 1.010 - - D1090342at2759
OrthoFinder 1 1.000 - - FOG0005172
OrthoInspector 1 1.000 - - oto89581
orthoMCL 1 0.900 - - OOG6_103232
Panther 1 1.100 - - LDO PTHR22842
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1959
SonicParanoid 1 1.000 - - X4205
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.870

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