DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4935 and AT5G64730

DIOPT Version :9

Sequence 1:NP_609782.2 Gene:CG4935 / 34955 FlyBaseID:FBgn0028897 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_568993.1 Gene:AT5G64730 / 836594 AraportID:AT5G64730 Length:299 Species:Arabidopsis thaliana


Alignment Length:271 Identity:113/271 - (41%)
Similarity:166/271 - (61%) Gaps:2/271 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVSASLDK 81
            :|||.|.|:|.||.|.|:||.|:.|:||||..|:|:|||..|..||.|...:.|::...|...|:
plant    18 EGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDR 82

  Fly    82 SIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDPVQVMKEARD 146
            .:.|||||||..:|:.|.|.|.|..|.||:.||:.:|.|.|.::..||.|:..::|||::....|
plant    83 QVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLD 147

  Fly   147 CITTVATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITYLAQTRDEQCLVAGCQDSVVRLLD 211
            .:.:|...:..|...|:||.|||:|:|:|....|.:|:|:..::.:.|..|::|||.||.:||||
plant   148 TVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLD 212

  Fly   212 CETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDLLDGKVLQRIRISDNGGVVHS 276
            ..||.||..|:||....:..:|.:.::||.::.||.||..|.:||:|.|||.:.|..|.  ||.|
plant   213 RTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDL--VVTS 275

  Fly   277 LATHPKRQEML 287
            ::.|||...||
plant   276 VSYHPKEDCML 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4935NP_609782.2 WD40 10..>302 CDD:225201 113/271 (42%)
WD40 10..281 CDD:238121 108/263 (41%)
WD40 repeat 21..57 CDD:293791 20/35 (57%)
WD40 repeat 62..98 CDD:293791 13/35 (37%)
WD40 repeat 105..135 CDD:293791 11/29 (38%)
WD40 repeat 140..178 CDD:293791 12/37 (32%)
WD40 repeat 186..222 CDD:293791 15/35 (43%)
WD40 repeat 229..254 CDD:293791 8/24 (33%)
AT5G64730NP_568993.1 WD40 10..298 CDD:238121 113/271 (42%)
WD40 repeat 64..100 CDD:293791 12/35 (34%)
WD40 repeat 105..143 CDD:293791 15/37 (41%)
WD40 repeat 150..180 CDD:293791 11/29 (38%)
WD40 repeat 187..223 CDD:293791 15/35 (43%)
WD40 repeat 231..267 CDD:293791 14/35 (40%)
WD40 repeat 273..297 CDD:293791 7/14 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0316
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12194
Inparanoid 1 1.050 237 1.000 Inparanoid score I1098
OMA 1 1.010 - - QHG54396
OrthoDB 1 1.010 - - D1090342at2759
OrthoFinder 1 1.000 - - FOG0005172
OrthoInspector 1 1.000 - - oto3282
orthoMCL 1 0.900 - - OOG6_103232
Panther 1 1.100 - - LDO PTHR22842
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4205
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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