DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4935 and SPBC713.05

DIOPT Version :9

Sequence 1:NP_609782.2 Gene:CG4935 / 34955 FlyBaseID:FBgn0028897 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_595344.1 Gene:SPBC713.05 / 2541181 PomBaseID:SPBC713.05 Length:297 Species:Schizosaccharomyces pombe


Alignment Length:290 Identity:92/290 - (31%)
Similarity:151/290 - (52%) Gaps:3/290 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KTTIDCK-QGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSY 73
            ||.:..| :..:..|:||..|.|.|:.|:::.::|||..||..:..|.||..|:.|.....||:.
pombe     6 KTKLSSKAKEPINVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTK 70

  Fly    74 IVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDPV 138
            ..|...||.|..|||:||...|||..|...:..:.:||||||..||..|:.|..||.|:....|:
pombe    71 FASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPI 135

  Fly   139 QVMKEARDCITTVATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITYLAQTRDEQCLVAGCQ 203
            ||:.:|:|.::::...|:.|...|.||.:||||||.|.|:.|....|||.:..::.....:....
pombe   136 QVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLSSDYFSHPITSVKTSKSASFSLISSL 200

  Fly   204 DSVVRLLDCETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDLLDGKVLQRIRIS 268
            :|.:.|||.|||.:|..|.|.:..:|.:......::..:.:||.||..:::||.:...:....:.
pombe   201 NSSIHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENETQITSTSVV 265

  Fly   269 DNGGVVHSLATHPKRQEMLFAR-RRDMYVF 297
            .. .:|..::.||...:.:.|. ..|::::
pombe   266 GT-PIVTDISCHPTMDDFIIATVHGDLFIY 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4935NP_609782.2 WD40 10..>302 CDD:225201 92/290 (32%)
WD40 10..281 CDD:238121 88/271 (32%)
WD40 repeat 21..57 CDD:293791 13/35 (37%)
WD40 repeat 62..98 CDD:293791 14/35 (40%)
WD40 repeat 105..135 CDD:293791 13/29 (45%)
WD40 repeat 140..178 CDD:293791 15/37 (41%)
WD40 repeat 186..222 CDD:293791 10/35 (29%)
WD40 repeat 229..254 CDD:293791 5/24 (21%)
SPBC713.05NP_595344.1 WD40 <7..274 CDD:225201 87/267 (33%)
WD40 16..297 CDD:238121 89/280 (32%)
WD40 repeat 20..54 CDD:293791 13/33 (39%)
WD40 repeat 60..96 CDD:293791 15/35 (43%)
WD40 repeat 101..138 CDD:293791 15/36 (42%)
WD40 repeat 146..179 CDD:293791 14/32 (44%)
WD40 repeat 183..219 CDD:293791 10/35 (29%)
WD40 repeat 227..264 CDD:293791 6/36 (17%)
WD40 repeat 270..294 CDD:293791 5/23 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I2667
eggNOG 1 0.900 - - E1_KOG0316
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I1179
OMA 1 1.010 - - QHG54396
OrthoFinder 1 1.000 - - FOG0005172
OrthoInspector 1 1.000 - - oto101064
orthoMCL 1 0.900 - - OOG6_103232
Panther 1 1.100 - - LDO PTHR22842
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1959
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.900

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