DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twe and MIH1

DIOPT Version :9

Sequence 1:NP_001260491.1 Gene:twe / 34954 FlyBaseID:FBgn0002673 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_013750.1 Gene:MIH1 / 855052 SGDID:S000004639 Length:554 Species:Saccharomyces cerevisiae


Alignment Length:366 Identity:99/366 - (27%)
Similarity:149/366 - (40%) Gaps:72/366 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LSQNMNGARLDG-TPKSTQ-----RIPANRTLNNFNSLS----SRTLGSFSSSCSSYESGNSLDD 123
            |..|.....:|| :|...|     .:..|...|:...||    |:||.|.:.:.|.....|:.|:
Yeast    69 LLTNHRSKEIDGPSPNIKQLGHRDELDENENENDDIVLSMHFASQTLQSPTRNSSRRSLTNNRDN 133

  Fly   124 EYMDMFEMESAENHNLELPDDLEVLLSGQLKSESNLEEMSNKKGSLRRCLSMYPSEQPEEAVQEP 188
            :.:.          .::.|        |..:..|:.    ::..||.|..||..|......||..
Yeast   134 DLLS----------RIKYP--------GSPQRSSSF----SRSRSLSRKPSMNSSSNSSRRVQRQ 176

  Fly   189 DQETNMPMKKMQRK--TLSMNDAEIMRALGDEPELIGDLSKPCTLPCLATGIRHRDLKT------ 245
            |.:.....:|..:|  .::.|......| ...|.....:...|...|||        ||      
Yeast   177 DGKIPRSSRKSSQKFSNITQNTLNFTSA-SSSPLAPNSVGVKCFESCLA--------KTQIPYYY 232

  Fly   246 -----------ISSDTLARLIQGEFDEQLGSQGGYEIIDCRYPYEFLGGHIRGAKNLYTRGQIQE 299
                       ||.:||..::|....|..  .....|||||:.||:.||||..:.|:::|.:::.
Yeast   233 DDRNSNDFFPRISPETLKNILQNNMCESF--YNSCRIIDCRFEYEYTGGHIINSVNIHSRDELEY 295

  Fly   300 AF--PTLTSNQENRR----IYVFHCEFSSERGPKLLRYLRSNDRSQHTHNYPALDYPELYILHNG 358
            .|  ..|.|:..|..    :.:.||||||.|||.|..:||:.||..:..:||.|.||::.||..|
Yeast   296 EFIHKVLHSDTSNNNTLPTLLIIHCEFSSHRGPSLASHLRNCDRIINQDHYPKLFYPDILILDGG 360

  Fly   359 YKEFFGLYSQLCQPSQYVPMLAPAH----NDEFRYFRAKTK 395
            ||..|..:.:||.|.|||.|.:..:    ..|...||.::|
Yeast   361 YKAVFDNFPELCYPRQYVGMNSQENLLNCEQEMDKFRRESK 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tweNP_001260491.1 Cdc25 243..363 CDD:238788 49/142 (35%)
MIH1NP_013750.1 MIH1 1..442 CDD:227436 99/366 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344710
Domainoid 1 1.000 88 1.000 Domainoid score I1821
eggNOG 1 0.900 - - E1_COG5105
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3806
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000931
OrthoInspector 1 1.000 - - otm46815
orthoMCL 1 0.900 - - OOG6_101194
Panther 1 1.100 - - O PTHR10828
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R583
SonicParanoid 1 1.000 - - X695
TreeFam 1 0.960 - -
1211.680

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