DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twe and stg

DIOPT Version :9

Sequence 1:NP_001260491.1 Gene:twe / 34954 FlyBaseID:FBgn0002673 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001263066.1 Gene:stg / 43466 FlyBaseID:FBgn0003525 Length:479 Species:Drosophila melanogaster


Alignment Length:481 Identity:197/481 - (40%)
Similarity:261/481 - (54%) Gaps:129/481 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QENFDPHDADMEYQAKRRKSAVQETPLQWMLKRHIPASTTVLSPITELSQNMNGARLDGTPK--- 83
            ||....:|.|:..|.::|.::              |....:|||             :|:|:   
  Fly    48 QEELSFYDDDVVPQDQQRSAS--------------PELMGLLSP-------------EGSPQRFQ 85

  Fly    84 -------------STQRIPANRTLNNFNSLSSRTLGSFSSSCSSYESGNSLDDEYMDMFEMES-A 134
                         |:...|| |:...||||        ||:| |.||  |:|||||::||||| :
  Fly    86 IVRQPKILPAMGVSSDHTPA-RSFRIFNSL--------SSTC-SMES--SMDDEYMELFEMESQS 138

  Fly   135 ENHNLELPDDLEVLLSGQLKSESNLEE---MSNKKGSLRRCLSMY----------PSEQPEEAVQ 186
            :...|..|..|..|:|||:|.:...:.   :|.::.|:||||||.          |.:.||.|..
  Fly   139 QQTALGFPSGLNSLISGQIKEQPAAKSPAGLSMRRPSVRRCLSMTESNTNSTTTPPPKTPETARD 203

  Fly   187 -----EPDQETN----------------------MPMKKMQ-------RKTLSMNDAEIMRALG- 216
                 ||....|                      .|:.::.       ||.:|:||||||.||. 
  Fly   204 CFKRPEPPASANCSPIQSKRHRCAAVEKENCPAPSPLSQVTISHPPPLRKCMSLNDAEIMSALAR 268

  Fly   217 ----DEPELIGDLSKPCTLPCLATGIRHRDLKTISSDTLARLIQGEFDEQLGSQGGYEIIDCRYP 277
                :|||||||.||...|| |..| ||||||:|||:|:|||::|||.:::.|   |.|||||||
  Fly   269 SENRNEPELIGDFSKAYALP-LMEG-RHRDLKSISSETVARLLKGEFSDKVAS---YRIIDCRYP 328

  Fly   278 YEFLGGHIRGAKNLYTRGQIQEAFPTL----TSNQEN------RRIYVFHCEFSSERGPKLLRYL 332
            |||.||||.|||||||..||.:.|.|:    ...|:|      |.|.:||||||||||||:.|:|
  Fly   329 YEFEGGHIEGAKNLYTTEQILDEFLTVQQTELQQQQNAESGHKRNIIIFHCEFSSERGPKMSRFL 393

  Fly   333 RSNDRSQHTHNYPALDYPELYILHNGYKEFFGLYSQLCQPSQYVPMLAPAHNDEFRYFRAKTKSW 397
            |:.||.::|:.||||.|||:|:|||||||||..:.:||:|..|..||.||:|:.:|:||||:|||
  Fly   394 RNLDRERNTNAYPALHYPEIYLLHNGYKEFFESHVELCEPHAYRTMLDPAYNEAYRHFRAKSKSW 458

  Fly   398 QCGEGGDSGIGGGGSRGLRKSRSRLL 423
                .|| |:||...| |:||||||:
  Fly   459 ----NGD-GLGGATGR-LKKSRSRLM 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tweNP_001260491.1 Cdc25 243..363 CDD:238788 76/129 (59%)
stgNP_001263066.1 Cdc25 297..425 CDD:238788 77/130 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456424
Domainoid 1 1.000 116 1.000 Domainoid score I5911
eggNOG 1 0.900 - - E1_COG5105
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I3648
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1423329at2759
OrthoFinder 1 1.000 - - FOG0000931
OrthoInspector 1 1.000 - - otm25431
orthoMCL 1 0.900 - - OOG6_101194
Panther 1 1.100 - - P PTHR10828
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R583
SonicParanoid 1 1.000 - - X695
1211.830

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