DRSC/TRiP Functional Genomics Resources

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Protein Alignment EndoGI and XRCC6

DIOPT Version :9

Sequence 1:NP_001260489.1 Gene:EndoGI / 34953 FlyBaseID:FBgn0028515 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001275905.1 Gene:XRCC6 / 2547 HGNCID:4055 Length:609 Species:Homo sapiens


Alignment Length:347 Identity:67/347 - (19%)
Similarity:116/347 - (33%) Gaps:108/347 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKRKAEDTQSDKMATAEKVAQNDYTI-----GLVD------PVKDYQKLIETRVQVDEIVDDDV 54
            :.|.:|::|:...::..:.....|..|     .||.      |:|.|:   ||...|.       
Human   243 LRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYR---ETNEPVK------- 297

  Fly    55 TKENFDRTAAAARDVIWRLLFDEAGTSQSNTEKASQLL---EEYRGDACFYDP----TPYNEWIV 112
            ||.....|:...       |...:.|.:|....:.|::   ||......|.||    ..:...::
Human   298 TKTRTFNTSTGG-------LLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVL 355

  Fly   113 KLRDEVLKKELLDFWRDVLVKKQLGPCWSRDSDLFDSDDTPPLEFYAHAGC-------TAPFAAS 170
            ..:...|:..|..:..:.||   :|     .|.||.:.....||....|.|       ..|:..:
Human   356 LKKHHYLRPSLFVYPEESLV---IG-----SSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVA 412

  Fly   171 LKVRAALEEQASLDQDGPATPTTPG-EL----SADDAAALS------------GEFEATLTK--- 215
            |     :.::..|| |.....|.|| :|    .|||...:.            |:.:|.:.|   
Human   413 L-----VPQEEELD-DQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRF 471

  Fly   216 -------ENPL--EEYRTLMKRFVLTKIIVPDSVHQASVKKIAAAAREIIWKLLFDGTPSAEDQN 271
                   |||:  :.:|.|  ..:...::.|:.....::.|:.|..:.:                
Human   472 TYRSDSFENPVLQQHFRNL--EALALDLMEPEQAVDLTLPKVEAMNKRL---------------- 518

  Fly   272 KAAELLQEYKGDAGFYGPDDYN 293
              ..|:.|:|   ....|.|||
Human   519 --GSLVDEFK---ELVYPPDYN 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoGINP_001260489.1 Ku_PK_bind 31..138 CDD:285938 22/119 (18%)
XRCC6NP_001275905.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
ku70 26..608 CDD:273151 67/347 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 536..562 67/347 (19%)
Interaction with DEAF1. /evidence=ECO:0000269|PubMed:22442688 550..609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12604
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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