DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRL-1 and CDC14

DIOPT Version :10

Sequence 1:NP_609780.1 Gene:PRL-1 / 34952 FlyBaseID:FBgn0024734 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_116684.3 Gene:CDC14 / 850585 SGDID:S000001924 Length:551 Species:Saccharomyces cerevisiae


Alignment Length:156 Identity:46/156 - (29%)
Similarity:64/156 - (41%) Gaps:16/156 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YKGMKFLITDRPSDITINHYIMELKKNNVNTVVRVCEPSYNTDELETQGITVKDLAFEDGTFPPQ 83
            |...|....::|....:|.:    ..|||..|||:....||....|..||...||.|||||.|..
Yeast   199 YLATKSSHLNQPFKSVLNFF----ANNNVQLVVRLNSHLYNKKHFEDIGIQHLDLIFEDGTCPDL 259

  Fly    84 QVVDEWFEVLKDKYQQNPEACVAVHCVAGLGRAPVLVALALI-ELGLKYEAAVEMIRDKRRGAIN 147
            .:|..:....:...::..:  :||||.|||||...|:...|| ..|......:..:|..|.|.:.
Yeast   260 SIVKNFVGAAETIIKRGGK--IAVHCKAGLGRTGCLIGAHLIYTYGFTANECIGFLRFIRPGMVV 322

  Fly   148 AKQLSFLE---------KYKPKARLK 164
            ..|..:|.         ||..:..||
Yeast   323 GPQQHWLYLHQNDFREWKYTTRISLK 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRL-1NP_609780.1 PTP-IVa 10..163 CDD:350350 44/153 (29%)
CDC14NP_116684.3 DSPn 12..151 CDD:464252
CDC14_C 161..340 CDD:350349 42/146 (29%)
PRK08581 403..>513 CDD:236304
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.