DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRL-1 and ptp4a3b

DIOPT Version :10

Sequence 1:NP_609780.1 Gene:PRL-1 / 34952 FlyBaseID:FBgn0024734 Length:176 Species:Drosophila melanogaster
Sequence 2:XP_696080.2 Gene:ptp4a3b / 567691 ZFINID:ZDB-GENE-030131-2635 Length:173 Species:Danio rerio


Alignment Length:162 Identity:84/162 - (51%)
Similarity:117/162 - (72%) Gaps:2/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PALIEYKGMKFLITDRPSDITINHYIMELKKNNVNTVVRVCEPSYNTDELETQGITVKDLAFEDG 78
            |..:.|..|:|:||..|::.|::.:|.:||:.:..|||||||.:|:...||..||||.|..|:||
Zfish     9 PVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDG 73

  Fly    79 TFPPQQVVDEWFEVLKDKYQQNPEACVAVHCVAGLGRAPVLVALALIELGLKYEAAVEMIRDKRR 143
            ..||.::||:|..:||..:.::|..||||||||||||||||||:||||.|:|||.|:.:||.||.
Zfish    74 APPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRH 138

  Fly   144 GAINAKQLSFLEKYKPKARLKHKN--GHKNSC 173
            ||.|:|||::||||:.|.||:.|:  .|::.|
Zfish   139 GAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKC 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRL-1NP_609780.1 PTP-IVa 10..163 CDD:350350 79/148 (53%)
ptp4a3bXP_696080.2 PTP_DSP_cys 9..158 CDD:475123 79/148 (53%)

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