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Protein Alignment PRL-1 and ptp4a3b
DIOPT Version :9
Sequence 1: | NP_001260487.1 |
Gene: | PRL-1 / 34952 |
FlyBaseID: | FBgn0024734 |
Length: | 176 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005158234.1 |
Gene: | ptp4a3b / 567691 |
ZFINID: | ZDB-GENE-030131-2635 |
Length: | 173 |
Species: | Danio rerio |
Alignment Length: | 162 |
Identity: | 84/162 - (51%) |
Similarity: | 117/162 - (72%) |
Gaps: | 2/162 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 PALIEYKGMKFLITDRPSDITINHYIMELKKNNVNTVVRVCEPSYNTDELETQGITVKDLAFEDG 78
|..:.|..|:|:||..|::.|::.:|.:||:.:..|||||||.:|:...||..||||.|..|:||
Zfish 9 PVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDG 73
Fly 79 TFPPQQVVDEWFEVLKDKYQQNPEACVAVHCVAGLGRAPVLVALALIELGLKYEAAVEMIRDKRR 143
..||.::||:|..:||..:.::|..||||||||||||||||||:||||.|:|||.|:.:||.||.
Zfish 74 APPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRH 138
Fly 144 GAINAKQLSFLEKYKPKARLKHKN--GHKNSC 173
||.|:|||::||||:.|.||:.|: .|::.|
Zfish 139 GAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKC 170
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PRL-1 | NP_001260487.1 |
PTP-IVa |
10..163 |
CDD:350350 |
79/148 (53%) |
ptp4a3b | XP_005158234.1 |
PTPc |
11..160 |
CDD:328744 |
80/148 (54%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
137 |
1.000 |
Domainoid score |
I4844 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
199 |
1.000 |
Inparanoid score |
I3757 |
OMA |
1 |
1.010 |
- |
- |
|
QHG54094 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001421 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm24237 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23339 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X788 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
9 | 9.070 |
|
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