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Protein Alignment PRL-1 and ptp4a3a
DIOPT Version :9
Sequence 1: | NP_001260487.1 |
Gene: | PRL-1 / 34952 |
FlyBaseID: | FBgn0024734 |
Length: | 176 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_998346.1 |
Gene: | ptp4a3a / 406460 |
ZFINID: | ZDB-GENE-040426-2220 |
Length: | 173 |
Species: | Danio rerio |
Alignment Length: | 167 |
Identity: | 96/167 - (57%) |
Similarity: | 126/167 - (75%) |
Gaps: | 2/167 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 RPAPALIEYKGMKFLITDRPSDITINHYIMELKKNNVNTVVRVCEPSYNTDELETQGITVKDLAF 75
||||..:.||.|:||||..|::.|::.:|.:|||..|.|||||||.:|:...||..||||.|..|
Zfish 6 RPAPVEVCYKNMRFLITHNPTNSTLSSFIEDLKKYGVTTVVRVCEITYDKTPLEKNGITVVDWPF 70
Fly 76 EDGTFPPQQVVDEWFEVLKDKYQQNPEACVAVHCVAGLGRAPVLVALALIELGLKYEAAVEMIRD 140
:||..||.:||::|..:||.::.:.|..||||||||||||||||||:||||.|:|||.|::.||.
Zfish 71 DDGAPPPSKVVEDWLSLLKRRFIEEPGCCVAVHCVAGLGRAPVLVAVALIESGMKYEDAIQFIRQ 135
Fly 141 KRRGAINAKQLSFLEKYKPKARLKHKNGH--KNSCSV 175
|||||||:|||::||||:||.||::|:.| ||.|.:
Zfish 136 KRRGAINSKQLTYLEKYRPKQRLRYKHPHIFKNKCCI 172
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PRL-1 | NP_001260487.1 |
PTP-IVa |
10..163 |
CDD:350350 |
89/151 (59%) |
ptp4a3a | NP_998346.1 |
PTPc |
11..173 |
CDD:304379 |
92/162 (57%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
137 |
1.000 |
Domainoid score |
I4844 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG2836 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
199 |
1.000 |
Inparanoid score |
I3757 |
OMA |
1 |
1.010 |
- |
- |
|
QHG54094 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001421 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm24237 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101823 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR23339 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X788 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
12 | 11.830 |
|
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