DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRL-1 and Ptp4a3

DIOPT Version :9

Sequence 1:NP_001260487.1 Gene:PRL-1 / 34952 FlyBaseID:FBgn0024734 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001159860.1 Gene:Ptp4a3 / 19245 MGIID:1277098 Length:173 Species:Mus musculus


Alignment Length:167 Identity:97/167 - (58%)
Similarity:124/167 - (74%) Gaps:2/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RPAPALIEYKGMKFLITDRPSDITINHYIMELKKNNVNTVVRVCEPSYNTDELETQGITVKDLAF 75
            ||||..:.|:.|:||||..||:.|::.:|.:|||....|||||||.:|:...||..||||.|..|
Mouse     6 RPAPVEVSYRHMRFLITHNPSNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEKDGITVVDWPF 70

  Fly    76 EDGTFPPQQVVDEWFEVLKDKYQQNPEACVAVHCVAGLGRAPVLVALALIELGLKYEAAVEMIRD 140
            :||..||.:||::|..:||.|:..:|.:|||||||||||||||||||||||.|:|||.|::.||.
Mouse    71 DDGAPPPGKVVEDWLSLLKAKFYNDPGSCVAVHCVAGLGRAPVLVALALIESGMKYEDAIQFIRQ 135

  Fly   141 KRRGAINAKQLSFLEKYKPKARLKHK--NGHKNSCSV 175
            |||||||:|||::||||:||.||:.|  :.||..|.|
Mouse   136 KRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCV 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRL-1NP_001260487.1 PTP-IVa 10..163 CDD:350350 90/151 (60%)
Ptp4a3NP_001159860.1 PTP_DSP_cys 5..158 CDD:421693 90/151 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 139 1.000 Domainoid score I4764
eggNOG 1 0.900 - - E1_KOG2836
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I3711
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54094
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001421
OrthoInspector 1 1.000 - - otm43989
orthoMCL 1 0.900 - - OOG6_101823
Panther 1 1.100 - - LDO PTHR23339
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X788
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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