DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRL-1 and Ptp4a1

DIOPT Version :10

Sequence 1:NP_609780.1 Gene:PRL-1 / 34952 FlyBaseID:FBgn0024734 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_035330.1 Gene:Ptp4a1 / 19243 MGIID:1277096 Length:173 Species:Mus musculus


Alignment Length:168 Identity:98/168 - (58%)
Similarity:127/168 - (75%) Gaps:2/168 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RPAPALIEYKGMKFLITDRPSDITINHYIMELKKNNVNTVVRVCEPSYNTDELETQGITVKDLAF 75
            ||||..:.||.|:||||..|::.|:|.:|.||||..|.|:|||||.:|:|..:|.:||.|.|..|
Mouse     6 RPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPF 70

  Fly    76 EDGTFPPQQVVDEWFEVLKDKYQQNPEACVAVHCVAGLGRAPVLVALALIELGLKYEAAVEMIRD 140
            :||..|..|:||:|..::|.|:::.|..|:|||||||||||||||||||||.|:|||.||:.||.
Mouse    71 DDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQ 135

  Fly   141 KRRGAINAKQLSFLEKYKPKARLKHK--NGHKNSCSVQ 176
            |||||.|:|||.:||||:||.||:.|  |||:|:|.:|
Mouse   136 KRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRL-1NP_609780.1 PTP-IVa 10..163 CDD:350350 89/151 (59%)
Ptp4a1NP_035330.1 PTP-IVa1 1..167 CDD:350513 94/160 (59%)
Interaction with ATF5. /evidence=ECO:0000269|PubMed:11278933 97..132 28/34 (82%)

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