DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRL-1 and ptp-4A2

DIOPT Version :10

Sequence 1:NP_609780.1 Gene:PRL-1 / 34952 FlyBaseID:FBgn0024734 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001379679.1 Gene:ptp-4A2 / 180677 WormBaseID:WBGene00004184 Length:190 Species:Caenorhabditis elegans


Alignment Length:170 Identity:89/170 - (52%)
Similarity:121/170 - (71%) Gaps:4/170 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RPAPALIEYKGMKFLITDRPSDITINHYIMELKKNNVNTVVRVCEPSYNTDELETQGITVKDLAF 75
            :|||:.|.:..|:|||||||::.:|..||.||:|:....|||||||:|:|..|:..||.|.|..|
 Worm    21 KPAPSEIAWGKMRFLITDRPNNSSIQSYIEELEKHGARAVVRVCEPTYDTLALKEAGIDVLDWQF 85

  Fly    76 EDGTFPPQQVVDEWFEVLKDKYQQNPEACVAVHCVAGLGRAPVLVALALIELGLKYEAAVEMIRD 140
            .||:.||.:|:..||::....::::|:..:||||||||||||||||:||||.|:|||.||||||.
 Worm    86 SDGSPPPPEVIKSWFQLCMTSFKEHPDKSIAVHCVAGLGRAPVLVAIALIEAGMKYEDAVEMIRT 150

  Fly   141 KRRGAINAKQLSFLEKYKPKARLK----HKNGHKNSCSVQ 176
            :||||:|.|||.|||.||....|:    :.:|.:.||.:|
 Worm   151 QRRGALNQKQLKFLETYKANGELRRLRGNVDGKQKSCCIQ 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRL-1NP_609780.1 PTP-IVa 10..163 CDD:350350 84/151 (56%)
ptp-4A2NP_001379679.1 PTP-IVa 22..173 CDD:350350 84/150 (56%)

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