DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-Ma2d and yfbK

DIOPT Version :10

Sequence 1:NP_723955.2 Gene:Ca-Ma2d / 34951 FlyBaseID:FBgn0261999 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_416773.1 Gene:yfbK / 946743 ECOCYCID:G7177 Length:575 Species:Escherichia coli


Alignment Length:608 Identity:130/608 - (21%)
Similarity:215/608 - (35%) Gaps:208/608 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLLLICGPHGGT------FPSTSIHWAEASAADEAVGKWATQFGDELFALAQKITKSQEIKEKYK 84
            |:|..|||....      .|||... .:..||.:|..|.|.|......||||     ||:    :
E. coli    14 LILSGCGPQPENKESQQQQPSTPTE-QQVLAAQQAAIKEAEQSAAAAKALAQ-----QEV----Q 68

  Fly    85 EYNARVELKNGTELIKSITKNVGRMLARKMDAVRCIQERAEYV-NENFEFNLTYALQNFTYFSSK 148
            :|:.:..|:             || |.......|..:.:|.:: |..               :::
E. coli    69 QYSDKQALQ-------------GR-LQEAPTFARAAKAKATHIANPG---------------TAR 104

  Fly   149 YSTFNGNSSEELEPNE-AEFA-----WMYRNME--LN------PDTHFYNTPVDTEHSSVHVPSN 199
            |..|:.|..:::..|. |.|:     ..|.|:.  ||      ||.      |..|....:.||:
E. coli   105 YQQFDDNPVKQVAQNPLATFSLDVDTGSYANVRRFLNQGLLPPPDA------VRVEEIVNYFPSD 163

  Fly   200 IWDRSERVLKTIMWSEHLDEVFRQNYQSDPALSWQYFGSDTGILRHYPAAQWTDTRPNRDDADTY 264
             ||..::  ::|..|:.:.  |...|:..|                   |.|.:.|.        
E. coli   164 -WDIKDK--QSIPASKPIP--FAMRYELAP-------------------APWNEQRT-------- 196

  Fly   265 DCRKRSWYIETATCSKD----------IVILLDHSGSM-TGFRHHVAKFTIRSILDTFSNNDFFT 318
                   .::....:||          :|.|:|.|||| :..|..:.:.:::.::......|...
E. coli   197 -------LLKVDILAKDRKSEELPASNLVFLIDTSGSMISDERLPLIQSSLKLLVKELREQDNIA 254

  Fly   319 ILRYSSEVNDIIPCFNGALVQATPENIEVFNQQIEQLD---DPEGYANLTLAYETAFQLLRKYYD 380
            |:.|:.:....:|..:|:      ...|: |..|:.||   ...|.|.|.|||:.|.:...|...
E. coli   255 IVTYAGDSRIALPSISGS------HKAEI-NAAIDSLDAEGSTNGGAGLELAYQQATKGFIKGGI 312

  Fly   381 SRHCVTNSTCNQAIMLVTDGVAGNTTEVFQKYNWG-------------NGENGTSQMDTRVFTYL 432
            :|           |:|.|||          .:|.|             ..|:|.:     :.|:.
E. coli   313 NR-----------ILLATDG----------DFNVGIDDPKSIESMVKKQRESGVT-----LSTFG 351

  Fly   433 LG----KEVTKVREIQWMACLNRGYYSHVQTLDE----VHEEVLKYVDVIATPLVLQNEQHPPTW 489
            :|    .|...||    :|.:..|.||::.||.|    ::.|:.:.:..:|..:..|.|.: |.|
E. coli   352 VGNSNYNEAMMVR----IADVGNGNYSYIDTLSEAQKVLNSEMRQMLITVAKDVKAQIEFN-PAW 411

  Fly   490 THAFTDKTYDPKTSNEKRPRLMISVGVPAFDRFYRHANSTNPRARLLGVAGTDVPVEDIDKLTLP 554
            ...:....|      ||| :|.:           .|.|:.|..|..:| ||..:        ||.
E. coli   412 VTEYRQIGY------EKR-QLRV-----------EHFNNDNVDAGDIG-AGKHI--------TLL 449

  Fly   555 YKLGVNGYSFVVSNNGYVLLHPD 577
            ::|.:||....:....|.   ||
E. coli   450 FELTLNGQKASIDKLRYA---PD 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-Ma2dNP_723955.2 VWA_N 124..251 CDD:462464 26/141 (18%)
vWA_VGCC_like 267..461 CDD:238740 48/224 (21%)
HK_sensor 547..669 CDD:365792 8/31 (26%)
VGCC_alpha2 772..>999 CDD:462488
yfbKNP_416773.1 YfbK 110..430 CDD:441879 85/420 (20%)
DUF3520 392..569 CDD:432277 25/109 (23%)
Blue background indicates that the domain is not in the aligned region.

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