DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-Ma2d and WAVH1

DIOPT Version :10

Sequence 1:NP_723955.2 Gene:Ca-Ma2d / 34951 FlyBaseID:FBgn0261999 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_179853.1 Gene:WAVH1 / 816799 AraportID:AT2G22680 Length:683 Species:Arabidopsis thaliana


Alignment Length:345 Identity:71/345 - (20%)
Similarity:116/345 - (33%) Gaps:98/345 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 DIVILLDHSGSMTGFRHHVAKFTIRSILDTFSNNDFFTILRYSS--------------------E 325
            |:|.:||.||..:|.:..:.|.|:|.:|......|..:|:.:||                    .
plant   302 DLVAVLDVSGRNSGGKLEMLKQTMRIVLSNLREMDRLSIIAFSSSSKRLSPLRRMTANGRRSARR 366

  Fly   326 VNDIIP---CFNGALVQATPENIEV---FNQQIEQLDDPEGYANLTLAY----ETAFQLLRKYYD 380
            :.|||.   ..:|..:..:.|.:.|   ..:.::.|||.......|..:    ..|.|:.:..: 
plant   367 IVDIITVPGSVSGVGIDFSGEGMSVNDALKKAVKVLDDRRQKNPFTAVFVLTDRQAHQVAQLAH- 430

  Fly   381 SR---------HCVTNS----TCNQAIML----------VTDGVA-GNTTEVFQ---KYNW-GNG 417
            ||         |.:...    |.|..:.|          :..|:. |..|.|:.   :..| |.|
plant   431 SRIPIHTIWLSHAIPEDAFARTINGYLSLSVQDLGLQLGIVSGLGQGEITSVYSLSGRPAWLGTG 495

  Fly   418 ENGTSQMDTRVFTYLL-------GKEVTKVREIQWMACLNRGYYSHVQTLDEVHEEVLKYVDVIA 475
            ......|.......||       ...:|..|..:.|...:|......|.|....:..|    :|.
plant   496 SIRLGDMYAEEERALLVEIKSPVNNSLTGSRSHKIMTVRSRYVDPTTQELRNPEDRAL----LIP 556

  Fly   476 TPLVLQNEQHPPTWTHAFTDKTYDPKTSNEKRPR-LMISVGVPAFDR------FY--RHANSTNP 531
            |||.:::..:|                 |..|.| |.:|....|..|      .|  .|...|:.
plant   557 TPLTVRSSSNP-----------------NISRLRNLHVSTRAVAESRRLIERNHYSGAHRLLTSA 604

  Fly   532 RARLL--GVAGTDVPVEDID 549
            ||.|:  |::.:|..:..:|
plant   605 RALLVQHGLSSSDACIRGLD 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-Ma2dNP_723955.2 VWA_N 124..251 CDD:462464
vWA_VGCC_like 267..461 CDD:238740 48/244 (20%)
HK_sensor 547..669 CDD:365792 1/3 (33%)
VGCC_alpha2 772..>999 CDD:462488
WAVH1NP_179853.1 RING_Ubox 124..180 CDD:473075
vWA_C3HC4_type 301..461 CDD:238743 33/159 (21%)
Blue background indicates that the domain is not in the aligned region.

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