DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-Ma2d and cachd1

DIOPT Version :9

Sequence 1:NP_001260486.1 Gene:Ca-Ma2d / 34951 FlyBaseID:FBgn0261999 Length:1215 Species:Drosophila melanogaster
Sequence 2:XP_001334829.3 Gene:cachd1 / 794807 ZFINID:ZDB-GENE-100819-3 Length:1290 Species:Danio rerio


Alignment Length:1027 Identity:212/1027 - (20%)
Similarity:364/1027 - (35%) Gaps:302/1027 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LLLLLICGPHGGTFPSTSIHWAEASAADEAVGKWATQFGDELFALAQKITKSQE--IKEKYKEYN 87
            ||:...||..|..        :|.|..:||          ::.|:..|...:||  :....:.:|
Zfish    37 LLVFACCGFCGAD--------SEFSILEEA----------QVLAVQMKKLSTQELGVLTMQRIFN 83

  Fly    88 ARV---ELKNGTELIKSITKNVGRMLARKMDAVRCIQERAEYVNENFEFNLT---YALQNFTYFS 146
            :.|   :..||...::.:.|.:.....|.:|.|   ....:.|..::..:||   .|:|:.....
Zfish    84 SFVYTEKTSNGETEVQQLAKKIREKFNRYLDVV---NRNKQVVEASYTAHLTSPLTAIQDCCSIP 145

  Fly   147 SKYSTFNGN---------SSEELEP--NEAEFAWMYRNMELNPDTHFYNTPVDTEHSSVHVPSNI 200
            .....|:||         |.:.|.|  |...|         ||                      
Zfish   146 PSMMEFDGNFNANVSKTVSCDRLSPTVNSRAF---------NP---------------------- 179

  Fly   201 WDRSERVLKTIMWSEHLDEVFRQNYQSDPALSWQYFGSDTGILRHYPAAQWTDTRPNRDDADTYD 265
                         ...|:.|...|.:|:|.:.||||.|:.||...:||.::       ....|::
Zfish   180 -------------GRDLNSVLADNLKSNPGIKWQYFSSEEGIFTLFPAHKF-------HCKGTFE 224

  Fly   266 CRKRSWYIETA-TCSKDIVILLDHSGSMTGFRHHVAKFTIRSILDTFSNNDFFTILRYSSEVN-- 327
            .|.|..|:... ..||.||:::||..|:|..:..:|:.....||::...:|..::|..:..|.  
Zfish   225 HRSRPVYVAAVRPQSKHIVVIIDHGASVTETQLQIARDAALVILNSIDEHDKISVLTIADTVRSC 289

  Fly   328 DIIPCFNGALVQATPE---NIEVFNQQIEQLDDPEGYANLTLAYETAFQLLRKYYDSRHCVTNST 389
            .:..|:...|..||.|   .:..|...|:..|....:|   :.::.||||||...:....:||: 
Zfish   290 SLDQCYKSFLSPATSETKRKMSTFISNIKASDSSTQHA---VGFQKAFQLLRNTSNVTRQLTNT- 350

  Fly   390 CNQAIMLVTDGVAGNTTEVFQK---YNWGNGENGTSQMDTRVFTY-LLGKEVTKVREIQWMACLN 450
             :..|:.::.|:....:...:|   .:....||........:.|| |:...||.::|:.::.   
Zfish   351 -DMMIIYLSSGITSRDSSEHEKRATLSAVKEENRHLNNSVMILTYALMNDGVTGLKELAFLR--- 411

  Fly   451 RGYYSHVQTLDEVHEEVLKY--VDVIATP------LVLQNEQHPPTWTHAFTDKTYDPKTSNEKR 507
                      |...:..|||  .|..|.|      :||....:..|....|....          
Zfish   412 ----------DLAEQNSLKYGVQDRSALPVVKGSMMVLNQLSNLETTVGRFYINL---------- 456

  Fly   508 PRLMISV---GVPAFDRFYRHANSTNPRA-----RLLGVAGTDVPVEDIDKLTLPYKLGVNGYSF 564
            |..||.|   .:|..|:.......|..|.     .||||.|.||.:..|.:....|:..:..|:|
Zfish   457 PNRMIDVATFSLPYADQMGDGFIMTVSRPCYFGNLLLGVVGVDVNLAYILEDVTYYQDSLASYTF 521

  Fly   565 VVSNNGYVLLHPDL-RP-IGTNGKMNPNYNSIDFTEVEHLFEDQSPREPGESI-------LHIRN 620
            ::.|.||.|:||.| || :.|...::        |::.| :|:    .||..:       |.:.:
Zfish   522 LIDNKGYTLMHPSLTRPYLMTEAPLH--------TDIIH-YEN----IPGFPVVRQNILSLPLGS 573

  Fly   621 AMVRHEANEFKSISVKFHYDKMRRVSEEKQD--YFFAPLPNTPFTLGIVMPSEYGKTWIKVGEEV 683
            .::....|.    |:.:|.:::|..:.:..:  |.:..:.:|.|.|.||        :::....|
Zfish   574 QVIAVPVNS----SLSWHMNRLRDPNRDAYNVSYAWKLVQDTSFILCIV--------YVQPEIPV 626

  Fly   684 DKNKHMKINISDFFIGENWKVHPDWVYCKYHYLE-------------------------GHEFKT 723
            .:.|::....|...:              ||.|:                         ...|.:
Zfish   627 KQLKNLNTAPSSKLL--------------YHRLDLLGQPSSCLHFKQLATVESPTVMLSAGSFSS 677

  Fly   724 PEAELREFLAKMQNDWKWSEQYAEDESDWDDKDDLNCGRKTLGDDAYYCNKELVNLLIFDAKVTN 788
            |...|.:...|     :..|.|....|| :.:...|.|.|:          .:.|.::..:.|| 
Zfish   678 PYEHLSQPETK-----RMVEHYTAYLSD-NTRLIANPGLKS----------SVRNEVMATSHVT- 725

  Fly   789 SSYGVWRFESDEERQLIERFRADL----RFVATMSGLTRWQFIFGEVEVDTDREFGDYHTTAIDE 849
                      ||...|:|....:.    |::||.:|:.|   |:.          |.....|.|.
Zfish   726 ----------DEWMSLMEMSSLNCYIVRRYIATPNGVLR---IYP----------GSLMDKAFDP 767

  Fly   850 T---WYKSAILQHHEDRAESFVYSVKYYDDPMEDSEVKVTASHAIFPRDGGKEAPA--------- 902
            |   ||..|:.     ......::..|.|  :..:...||.||.|       .||:         
Zfish   768 TRRQWYLHAVA-----NPGLITFTGPYLD--VGGAGYVVTISHTI-------HAPSSQMASGYTV 818

  Fly   903 CVVGFQFSHARMWERFFNITAVDHCNHCLPICTDD---DVDCVVIDNNAYIV 951
            .|:|..|:     .|:|....:|    .||||..|   .:.|.::::..|:|
Zfish   819 AVMGIDFT-----LRYFYKVLLD----LLPICNQDKGNKIRCFIMEDRGYLV 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-Ma2dNP_001260486.1 VWA_N 124..251 CDD:285584 29/140 (21%)
vWA_VGCC_like 267..461 CDD:238740 45/203 (22%)
Cache_1 510..587 CDD:280839 28/86 (33%)
cachd1XP_001334829.3 VWA_N 102..217 CDD:285584 33/161 (20%)
vWFA 226..>355 CDD:294047 34/133 (26%)
Cache_1 469..536 CDD:280839 21/66 (32%)
Cache_1 785..866 CDD:280839 23/95 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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