DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ca-Ma2d and unc-36

DIOPT Version :9

Sequence 1:NP_001260486.1 Gene:Ca-Ma2d / 34951 FlyBaseID:FBgn0261999 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_001040851.1 Gene:unc-36 / 176155 WormBaseID:WBGene00006772 Length:1249 Species:Caenorhabditis elegans


Alignment Length:1407 Identity:323/1407 - (22%)
Similarity:541/1407 - (38%) Gaps:405/1407 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LLLLLICGPHGGTFPSTSIHWAEASAADEAVGKWATQFGDELFALAQKITKSQEIKEKY------ 83
            ||::|      .|:.||:     :|...|::.:.|....:.:.....||:....:|:.|      
 Worm     6 LLVVL------ATYVSTT-----SSFNKESIKECAKVLSEHMKETFSKISHETILKQNYEKLVEE 59

  Fly    84 KEYNARVELKNGTELIKSITKNVGRMLARKMDAVRC-IQERAEYVNENFEFNLTYALQNFTYFSS 147
            ::::.|.|||.....|:...|      .|...|.:. |...|..|..:...|...:.....:.|:
 Worm    60 EQFDPRAELKKSKHRIEDYLK------VRSQFAYKAKISLEARSVRNDSTVNDPQSKSFIRFMSA 118

  Fly   148 KYSTFNGNS----------SEELEPNEAEFAWMYRNMELNPDTHFYNTPVDTEHSSVHVPSNIWD 202
            |    .||.          .:.|:.||.      ::..|..:.:||..|..:..|:||:|:.::|
 Worm   119 K----QGNDGTTIYESNHLGKRLKVNET------KSFNLTQNANFYTLPTSSVSSAVHIPTPLYD 173

  Fly   203 RSERVLKTIMWSEHLDEVFRQNYQSDPALSWQYFGSDTGILRHYPAAQWTDTRPNRDD-ADTYDC 266
            |:|.:|:.|.||: :|.|:|.|.:....|::|.|.|:.|.:|:||||.|  ...|:|: .|.:||
 Worm   174 RNEDLLRKIDWSD-IDAVYRTNREETKDLAFQLFCSEAGYMRYYPAASW--FWDNQDEHLDLFDC 235

  Fly   267 RKRSWYIETATCSKDIVILLDHSGSMTGFRHHVAKFTIRSILDTFSNNDFFTILRYSSEVNDIIP 331
            |...|||.:||.||:::|:||.||||.|.|:.|||.|..:||:|.|:||:|.|:.:|.....:..
 Worm   236 RNTEWYINSATNSKNVLIMLDMSGSMLGQRYEVAKQTTEAILETLSHNDYFNIMTFSKNTFLLDG 300

  Fly   332 CFNG--ALVQATPENIEVFNQQIEQLDDPEGYANLTLAYETAFQLL------------------- 375
            | ||  .|:|||..|.:...::::.... ||.|....|...||.:|                   
 Worm   301 C-NGTNGLLQATMRNKKALRRKMDTYQS-EGKAEYEKALPLAFSVLLDLKGSYALYTKEEMSMMS 363

  Fly   376 ---------------------RKYYDSRHCVTN-------STCNQAIMLVTDGVAGNTTEVFQKY 412
                                 ::|.||   :.|       ..|...|||:|||......::|..|
 Worm   364 ANATNEYQFHLELPEHVLAATKQYIDS---INNGGGDNNRGACENVIMLITDGAPNAYKKIFDMY 425

  Fly   413 NWGNGENGTSQMDTRVFTYLLGKEVTKVREIQWMACLNRGYYSHVQTLDEVHEEVLKYVDVIATP 477
            |        :....||||:|:|.|.....|::.|||.||||..||..:.:|.|::..|:..::..
 Worm   426 N--------ADKKVRVFTFLVGDEAIDFNEVREMACNNRGYMVHVANMADVDEKIHHYIRRMSRV 482

  Fly   478 LVLQNEQHPPT--WTHAFTDKTYDPK-----------------------------TSNEKRPRLM 511
            :....::....  ||..:.::.|.|:                             ..:|.|.|:.
 Worm   483 VGRHYKESGQLSWWTGVYRERLYLPRPEIFAEPVPITNQSFAVMNKMASRRKIRLQKSEARSRMF 547

  Fly   512 I-SVGVPAFDRFYRHANSTNPRARLLGVAGTDVPVEDIDKLTLPYKLGVNGYSFVVSNNGYVLLH 575
            : :|..|..      .|.|     .:|||..::|:.::.:.:.|..:|...|.|::..||:|:.|
 Worm   548 VTTVSYPVI------VNET-----FMGVAAVNIPLTEVAQKSHPANIGSKSYFFMLDQNGFVMTH 601

  Fly   576 PDLRPIGTNGKMN-PNYNSIDFTEVEHLFEDQSPR-------------EPGESILH--------I 618
            |.||||....|.: .|||::|..|:| :.::|:.|             |.|.:...        :
 Worm   602 PQLRPIDPFTKYHKQNYNNMDLLELE-VGQNQNVRSSQKSQAVSDLVCESGANYAECVDDLRKAV 665

  Fly   619 RNAMVRHEANEFKSISVKFHYDKMRRVSEEKQDYFFAPLPNTPFTLGIVMPSEYGKTWIKVGEEV 683
            |..::..:.::.:.:.|.:..:.:.||..:...|:...:.:..|.||:.:........:|..::.
 Worm   666 RKMIIDCDNSDVQQLDVLYATELLDRVYPQTNTYYAECINHANFVLGLAVAKGDDYRVVKKQKKY 730

  Fly   684 DKNKHMKINISDFFIGENWKVHPDWVYCKYHYLEGHEFKTPEAELREFLAKMQNDWKWSEQYAED 748
            |..: :|:   |:...:.|::||.|.||..:..:.|..|....|:                ||:.
 Worm   731 DFGR-VKM---DWMGDKRWRLHPHWRYCFLNDTDTHMSKEEAFEI----------------YAQQ 775

  Fly   749 ESDWDDKDDLNCGRKTLGDDAYYCNKELVNLLIFDAKVTNSSYGVWRFESDEERQLIERFRADLR 813
            .|| ..|..|.|..:          :.||..|:.|.:.|::....|    |.:...::.....|.
 Worm   776 MSD-SGKAPLLCEYR----------RNLVEKLLLDMEATSNLIDSW----DTQFNFMKNNLIHLA 825

  Fly   814 FVATMSGLTRWQFIFGEVEVDTDREFGDYHTTAIDETWYKSAILQH--H----EDRAESFVYSV- 871
            |.||.||:.|:..:       |.::: ||    ||..|   :|.:|  |    |...||:.:.: 
 Worm   826 FFATPSGMIRYYNL-------TLQDY-DY----IDPYW---SIFEHIGHLLSIEHAQESYNHFIT 875

  Fly   872 ---------KYY-------DDPMED----------SEVKVT-------------ASHAIFPRDGG 897
                     :||       |..|.|          ||.::|             |..||:.    
 Worm   876 DLNRKSTDDRYYRRAVRMKDTIMFDVSNNSKIWYKSETQLTGYGLNENLTMLGQAFKAIYL---- 936

  Fly   898 KEAPACVVGFQFSHARMWERFFNITAVDH-----CNHCLPICTDDDVDCVVIDNNAYIVIGQNIN 957
            .:|...|.||:|             |.||     ..|..| .:||...||::|.:||:......:
 Worm   937 DKAVLGVSGFEF-------------AYDHVVDTMAEHGCP-ASDDRKWCVLLDEHAYVFFSNQND 987

  Fly   958 TT--------GKFFGEFHGDV-------MTAMVERGIFLSIEVYDYQEQCKEEPKAGSDGHGL-- 1005
            .:        ||...::.|.:       |..:||...:..:...|.|..||.|....:.|:.|  
 Worm   988 ISYEDYLVGKGKHISQYFGGLNRIAQRAMALLVENKFYTKLTYTDNQAVCKAEKVVTTSGNRLRP 1052

  Fly  1006 LHPL-RLLSLGWKYLV-------GRLFFEYQRIQWW-ADGAPFMEYTDEIEDEYVAVGDGGKSSA 1061
            .:|: |.|...:.::|       |........||:. |..|.|.|.||                 
 Worm  1053 FYPIFRFLMQTFNFMVRLASQISGGFLIWLPNIQFTEAYTASFHEGTD----------------- 1100

  Fly  1062 SKPKDDSDDENAMFDEPEPDPIYKACDKRSTLYALQPSA--------LVGINDFVEAPSTRPFLV 1118
                                 :| .|.|:|:.|......        ||..|     .|.||..:
 Worm  1101 ---------------------VY-PCPKQSSFYFSNKDGKNRPGTTHLVNGN-----RSERPCKM 1138

  Fly  1119 KK----------IPNSNLVLVVVNVLMPSRSVRLTTEPQRMEYDKEFPCYKLNMSFYERRRIEE- 1172
            ..          :..:|||:|.:.....|.:....:|.. ||...:.|     ..|.|.:..|. 
 Worm  1139 NAKCSVKMEASFVDGTNLVMVWITQDKASENCYDESECS-MEISNQVP-----FGFEEVKNEETC 1197

  Fly  1173 -------------CYTVHED--EELYTYCGNASRLVLTLQLM 1199
                         ||::.:|  |.....|..:..:|...|::
 Worm  1198 EENEKRKSKANDVCYSIDDDDSENERRPCSTSPTIVSIFQIL 1239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-Ma2dNP_001260486.1 VWA_N 124..251 CDD:285584 39/136 (29%)
vWA_VGCC_like 267..461 CDD:238740 76/242 (31%)
Cache_1 510..587 CDD:280839 21/77 (27%)
unc-36NP_001040851.1 VWA_N 95..221 CDD:285584 39/136 (29%)
vWA_VGCC_like 236..466 CDD:238740 76/242 (31%)
Cache_1 548..606 CDD:280839 18/68 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I6290
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H134748
Inparanoid 1 1.050 255 1.000 Inparanoid score I1950
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28804
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000496
OrthoInspector 1 1.000 - - otm14582
orthoMCL 1 0.900 - - OOG6_103783
Panther 1 1.100 - - O PTHR10166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X365
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.970

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