DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-Ma2d and tag-180

DIOPT Version :9

Sequence 1:NP_001260486.1 Gene:Ca-Ma2d / 34951 FlyBaseID:FBgn0261999 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_001022363.1 Gene:tag-180 / 174730 WormBaseID:WBGene00007041 Length:1067 Species:Caenorhabditis elegans


Alignment Length:1264 Identity:252/1264 - (19%)
Similarity:458/1264 - (36%) Gaps:342/1264 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MTHFAVILTAFSFSQPLLLLLICGPHGGTFPSTSIHWAEASAADEAVGKWATQFGDEL---FALA 70
            |.:..|:|...|.||              .|..:|..|.||.|         ||...:   |...
 Worm     1 MGYVHVVLFWLSLSQ--------------LPVDTIEEAPASIA---------QFSANILRDFETQ 42

  Fly    71 QKITKSQEIKEKYKEYNARVELKNGTELIKSITKNVGRMLARKMDAVRCIQERAEYVNENFEFNL 135
            .:.:..||..||.|. :.:.:.::..|.::..|:::.|::..::||::.:...||.....|:   
 Worm    43 SRFSLVQEEFEKLKP-DIKSKKEDAAEKLRVATEHLDRLVTNRVDALKKLASSAEASAAVFD--- 103

  Fly   136 TYALQNFTYFSSKYSTFNGNSSEELEPNEAEFAWMYRNMELNPDTHFYNTPVDTEHSS---VHVP 197
                   .|....|:....:...|        |:|.:..|  .|.||.:..|  ||:|   :|:.
 Worm   104 -------EYDDQAYAVPQADKRCE--------AYMKKMNE--SDMHFVSNMV--EHNSKSGIHIT 149

  Fly   198 SNIWDRSERVLKTIMW--SEHLDEVFRQNYQSDPALSWQYFGSDTGILRHYPAAQWTDTRPNRDD 260
            ...:....||::...|  ::||::....|.:..|.:..||.|:.:|:.|.||...| ...|....
 Worm   150 VESYQCDPRVMRDFDWTGTKHLEKTMSDNKEKAPEMGHQYIGTYSGLTRMYPRRHW-KVEPTPIT 213

  Fly   261 ADTYDCRKRSWYIETATCSKDIVILLDHSGSMTGFRHHVAKFTIRSILDTFSNNDFFTILRYSSE 325
            .|.:|.|.|.|::...:..||||.|||:|||:.|...|:.|.|:..||.|.|.||:|..:.:::.
 Worm   214 IDLFDPRFRPWFVNAESVPKDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYFFGVYFNNH 278

  Fly   326 VNDIIPCFNGALVQATPENIEVFNQQIEQLDDPEGYANLTLAYETAFQLLRKYYDSRHCV---TN 387
            .|.||.|.|...:.||..|.:||.:::..|::.: .|:.....:.:..:||...||...:   ..
 Worm   279 FNPIISCANRTFMPATTSNKKVFFEELGMLEEKD-QAHFATPLKFSLDVLRGNLDSNQSLFADYR 342

  Fly   388 STCNQAIMLVTDGVAGNTTEVF-QKYNWGNGENGTSQMDTRVFTYLLGKEVTKVREIQWMACLNR 451
            |..::.:::.||||.....::. :::...|.|.      .|:|.:.:|...:.:...|:|||.:.
 Worm   343 SEGHKLLIIFTDGVDEWPHQILDEEFQTRNSEL------IRIFGFSMGYGTSLLPLQQYMACKSH 401

  Fly   452 GYYSHVQTLDEVHEEVLKYVDVIATPLVLQN---------------EQHPPTWTHAFTDKTYDPK 501
            |.||.:.::          :||......:||               |:..|:||..:.:      
 Worm   402 GGYSEIDSI----------MDVKPQSRTIQNVLSQVRGDELKGTNAEKREPSWTQLYME------ 450

  Fly   502 TSNEKRPRLMISVGV-PAFDRFYRHANSTNPRARLLGVAGTDVPVEDIDKLTLPYKLGVNGYSFV 565
             :....|.:.:|:.: .:..|.:|.       .:|.||...|:.:::..| .||.. ....|.::
 Worm   451 -TQGTGPIVTLSLPILTSEQRIWRD-------QKLAGVVAIDISIKEFTK-HLPTS-SEQMYGYI 505

  Fly   566 VSNNGYVLLHPDLRPIGTNGKMNPNYNSIDFTEVEHL-----FEDQSPREPGESILHIR----NA 621
            |.|||.::.||.|:              |..|||..:     ::.|..::...|.|.:.    :.
 Worm   506 VDNNGMLIYHPQLQ--------------IPKTEVHCVRRSACYDAQQVKQKAGSGLRVHYGFSDE 556

  Fly   622 MVRHEANEFKSISVKFHYD---------KMRR-----------VSEEKQDYFFAPLPNTPFTLGI 666
            .|........||.....||         .:||           :.:..::|..:.:.::||||.|
 Worm   557 RVYRLVGLIDSIPTLDMYDLEGDSTAIRDLRRRITTKTCYEEAIKDNSKEYHCSHIKDSPFTLVI 621

  Fly   667 VMPSEYGKTWIKVGEEVDKNKHMKINISDFFIGENWKVHPDWVYCKYHYLEGHEFKTPEAELREF 731
            |...:.            |..:...::.:..:.:|..|               .|..|..::.: 
 Worm   622 VNNIQL------------KTVYYDDSVQELGLTDNKLV---------------TFFYPRRDVCQ- 658

  Fly   732 LAKMQNDWKWSEQYAEDESDWDDKDDLNCGRKTLGDDAYYCNKELVNLLIFDAKVTNSSYGVWRF 796
                   ||..|..|.|.                                         :.||..
 Worm   659 -------WKLDEYAAHDR-----------------------------------------FRVWSD 675

  Fly   797 ESDEERQLIERFRADLRFVATMSGLTRWQFIFGEVEVDTDREFGDYHTTAIDETWYKSAILQHHE 861
            .|::|....:..|....|.   .||..|...:.:.:::        |||.:...:.::|.:.|: 
 Worm   676 ISEKEICAQDDMRLPRAFT---KGLGSWTQSWPKSDIE--------HTTCLLAQYPENASVPHY- 728

  Fly   862 DRAESFVYS----VKYYD----------DPMEDSEVKVTASH----------------AIFPRDG 896
              ..|||::    ..:|.          :...|.|:|:|.::                .|...|.
 Worm   729 --VNSFVHTRSKLTAFYPTCSSHDMKAVNKKFDEEIKLTDNNDFVQFSMRSESLLIYRTIADYDN 791

  Fly   897 GKEAPACVVGFQFSHARMWERFFNITAVDHCNHCLPICTDDDVDCVVIDNNAYIVIGQNINTTGK 961
            .:.|   |||.|:......:.|.|.|   ..|....||...  :|.:|..|.: ||..:.:....
 Worm   792 NRLA---VVGTQWKENFFDQYFDNFT---RQNPDWKICRKQ--ECSIITRNGH-VIASSAHRAPA 847

  Fly   962 FFGEFHGDVMTAMVERGIFLSIEVYDYQEQCKEEPKA--GSDGHGLLHPLRLLSLGWKYLVGRLF 1024
            ...:|...:..::|:..:..:....:.|.:||.:..|  .|...|....||       |.|..: 
 Worm   848 HLAKFDPQLFESLVKVNLVSTNSWTEVQSECKAKRVAPWSSAAPGSSSILR-------YFVTSI- 904

  Fly  1025 FEYQRIQWWADGAPFMEYTDEIEDEYVAVGDGGKSSASKPKDDSDDENAMFDEPEPDPIYKAC-- 1087
            |:..:..:|.:          :.:..:.:.|...|...        ....|.:.:|   ::.|  
 Worm   905 FKLAKTSFWRN----------LLESALTLVDAQPSMTG--------NTCTFQKIKP---FERCFM 948

  Fly  1088 ---DKRSTLYALQPSALVGINDFVEAPSTRPFLVKKIPNSNLVLVVVNVLMPSRSVRLTTEPQRM 1149
               ..|.||...:...|.|::.........|     :|::.|.|::.                  
 Worm   949 KFFHYRMTLNITKQLQLTGMSTCSRYAKLYP-----VPHTTLSLIIA------------------ 990

  Fly  1150 EYDKEFPCYKLNMSF-YERRRIEECYTVH 1177
              |:....|:....| .|.|::|:|..||
 Worm   991 --DRACSQYRPKRIFESEPRKLEKCDVVH 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-Ma2dNP_001260486.1 VWA_N 124..251 CDD:285584 31/131 (24%)
vWA_VGCC_like 267..461 CDD:238740 57/197 (29%)
Cache_1 510..587 CDD:280839 18/77 (23%)
tag-180NP_001022363.1 VWA_N <106..201 CDD:369855 25/106 (24%)
vWA_VGCC_like 220..411 CDD:238740 57/207 (28%)
dCache_1 <430..>517 CDD:376917 21/102 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I6824
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000496
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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