DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-Ma2d and cacna2d1

DIOPT Version :9

Sequence 1:NP_001260486.1 Gene:Ca-Ma2d / 34951 FlyBaseID:FBgn0261999 Length:1215 Species:Drosophila melanogaster
Sequence 2:XP_017207543.2 Gene:cacna2d1 / 101882457 -ID:- Length:1094 Species:Danio rerio


Alignment Length:1197 Identity:312/1197 - (26%)
Similarity:541/1197 - (45%) Gaps:192/1197 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VGKWATQFGDELFALAQKITKSQEIKEKY--KEYNARVELKNGTELIKSITKNVGRMLARKMDAV 117
            :.:|..|...||.:||...:....:::.:  .:.:..|...|..:|:::..:|:...|.::..|:
Zfish    42 IKEWVDQLQQELVSLADTASAGDNLRQIFMDNQKSFTVRSNNAVQLVETAARNIENFLKKRATAL 106

  Fly   118 RCIQERAEYVNENFEFNLTYALQNFTYFSSKYSTFNGNSSEELEPNEAEFAWMYRNMELNPDTHF 182
            ..:...||......::...:|..:..||         |:.:.||.|:.|........|...|..|
Zfish   107 ETLATAAENFQMEHQWKDEFAEDDIVYF---------NAKDNLETNDTEGRKNRIRPEFKEDPSF 162

  Fly   183 YNTPVDTEHSSVHVPSNIWDRSERVLKTIMWSEHLDEVFRQNYQSDPALSWQYFGSDTGILRHYP 247
            .|......|::||:|::|:|.|..||..:.|:|.|::||::|.:.||.|.||.|||.||:.|.||
Zfish   163 KNRLTSYNHTAVHIPTDIYDGSTIVLNELNWTEALEDVFKKNREEDPTLLWQVFGSATGLARFYP 227

  Fly   248 AAQWTDTRPNRDDADTYDCRKRSWYIETATCSKDIVILLDHSGSMTGFRHHVAKFTIRSILDTFS 312
            |:.|.|.|......|.||.|:|.||::.|...||::||:|.|||::|....:.:.::..:|:|.|
Zfish   228 ASPWMDARKTPSKIDLYDVRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLS 292

  Fly   313 NNDFFTILRYSSEVNDIIPCFNGALVQATPENIEVFNQQIEQLDDPEGYANLTLAYETAFQLLRK 377
            ::|:..::.::::||: ..||: .||||...|.::....::.: ..:|..|.|..:|.||..|  
Zfish   293 DDDYVNVVHFNTKVNN-TACFD-HLVQANVRNKKILKDAVQNI-TAKGITNYTKGFEFAFNQL-- 352

  Fly   378 YYDSRHCVTNSTCNQAIMLVTDGVAGNTTEVFQKYNWGNGENGTSQMDTRVFTYLLGKEVTKVRE 442
               |...::.:.||:.|||.|||......|:|.::|        .....||||:.:|:.......
Zfish   353 ---SNPNISRANCNKIIMLFTDGGEERAEEIFSRHN--------IDRKVRVFTFSVGQHNYDTGP 406

  Fly   443 IQWMACLNRGYYSHVQTLDEVHEEVLKYVDVIATPLVLQNEQHPPTWTHAFTDKTYDPKTSNEKR 507
            |:||||.|:||:..:.::..:.....:|:||:..|:||.:.:. ..||:.:.|..         .
Zfish   407 IKWMACQNKGYFYEIPSIGAIRINTQEYLDVLGRPMVLADAKQ-VQWTNVYLDAL---------E 461

  Fly   508 PRLMISVGVPAFDRFYRHANSTNPRAR-----LLGVAGTDVPVEDIDKLTLPYKLGVNGYSFVVS 567
            ..|:|:..:|.|::    ..||..|:|     :|||.|.||.::||.:||..:.:|.|||.|.:.
Zfish   462 LGLVITGTLPVFNK----TKSTEARSRSQNQLILGVMGVDVSLDDIKRLTPRFTIGPNGYYFAID 522

  Fly   568 NNGYVLLHPDLRPIGTNGKMNPNYN---SIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEANE 629
            .||||||||:|:|      .||.:.   ::||.:.| |..|..        :.||..|:.:.:.|
Zfish   523 PNGYVLLHPNLQP------KNPKFQEPVTLDFLDAE-LENDIK--------VQIRTMMINNSSGE 572

  Fly   630 FKSISVKFHYDKMRRVSEEKQDYFFAPLPNTPFTLGIVMPSEYGKTWIKVGEEVDKNKHMKINIS 694
             |:|.........|.:....:.|.:||:..|.::|.:|:| ||...:|:.            |:.
Zfish   573 -KTIETLVKSQDERYIDRGIRKYTWAPVNGTDYSLALVLP-EYSLHYIEA------------NLG 623

  Fly   695 DFF--IGENW--KVHPDWVYCKYHYLEGHEFKTPEAELREFLAKMQNDWKWSEQYAEDESDWDDK 755
            |..  :...|  ||.......|:... |:.|..|....::......|     .|:..|.:::.:|
Zfish   624 DTIKQVMSQWGNKVFETIQQEKFEEF-GYTFIAPREYCKDLKVSSNN-----TQFLMDFNEYINK 682

  Fly   756 DDLNCGRKTLGDDAYYCNKELVNLLIFDAKVTNSSYGVWRFESDEERQLIERFRADLRFVATMSG 820
                   :|..|..  ||..|||.::.||.:|.....||:      .|.::...|  |||||..|
Zfish   683 -------QTPNDPT--CNYTLVNRMLLDAGLTAKLIKVWK------EQSVDGVLA--RFVATDGG 730

  Fly   821 LTRWQFIFGEVEVDTDREFGDYHTTAIDETWYKSAILQHHEDRAESFVYSVKYYDDPMEDS-EVK 884
            :||   ::.:   ....|:|: ::...|.::||.::     |. :.::::..|.:...|.. |..
Zfish   731 ITR---VYPK---SAGEEWGE-NSETYDSSFYKRSL-----DN-DIYIFTAPYVNKSRESGYESG 782

  Fly   885 VTASHAI-FPRDGGKEAPACVVGFQFSHARMWERFFNITAVDHCNH--CLPICTDDDVDCVVIDN 946
            :..|.|: ...||.|..|| |||.:.:.:.....|.|.|...:|..  |..:..|..||||::|:
Zfish   783 ILVSKAVDLDIDGAKLKPA-VVGVKLNVSAWMNSFINATTKKNCKDEICGCLRNDKQVDCVILDD 846

  Fly   947 NAYIVIG---QNINTTGKFFGEFHGDVMTAMVERGIFLSIEVYDYQEQC--KEEPKAGSDGHGLL 1006
            ..::::.   :.|...|:||||....:|..:|...::...:.||||..|  :.|.||.: ||..:
Zfish   847 GGFLLMSNQEEYIQQIGQFFGEVDPVLMITLVNTSLYSFNKTYDYQSVCDPERETKAAA-GHRAI 910

  Fly  1007 HP---LRLLSLGWKYLVGRLFFEYQRIQWWADGAPF---------MEYTDEIEDEYVAVGDGGKS 1059
            :.   ..||::|                |||..|.:         :...:.|...|         
Zfish   911 YVPTIADLLTVG----------------WWASTAVWSILQQLLLSLTLPNVIGTVY--------- 950

  Fly  1060 SASKPKDDSDDENAMFDEPEPDPIYKACDKRSTLYAL--QPSALVGINDFVEAPSTRPFLVKKIP 1122
                   ..||.:..|.:       ::|....|.|..  :..:..|..|.  ...:|.:..:|:|
Zfish   951 -------SEDDLSDAFSK-------ESCITEQTQYFFENENKSFSGAMDC--GNCSRMYRAEKLP 999

  Fly  1123 NSNLVLVVVNVLMPSRSVRLTTEPQRMEYDKE---FPCYKLNMSFYERRRIEECYTVHEDEELYT 1184
            |:|||.::.:..:...|  ..|:|.:......   .||.......| |:..:.|:..:.||:. :
Zfish  1000 NTNLVFLISDAKISCMS--CDTKPLKQAEQPSNGPDPCVLAQKPRY-RKGPDVCFDNNADEDA-S 1060

  Fly  1185 YCGNASRLVLTL-QLMPLTIILVFYLT 1210
            .||..|.|..:| .::.|.::|::.||
Zfish  1061 DCGGGSSLSPSLWPMLALQLLLLWLLT 1087

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-Ma2dNP_001260486.1 VWA_N 124..251 CDD:285584 43/126 (34%)
vWA_VGCC_like 267..461 CDD:238740 59/193 (31%)
Cache_1 510..587 CDD:280839 33/81 (41%)
cacna2d1XP_017207543.2 VWA_N 119..231 CDD:312040 41/120 (34%)
vWFA 247..425 CDD:320736 59/193 (31%)
dCache_1 <490..609 CDD:308398 44/134 (33%)
VGCC_alpha2 638..1025 CDD:312092 105/467 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 85 1.000 Domainoid score I8115
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D237570at33208
OrthoFinder 1 1.000 - - FOG0000496
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X365
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
77.020

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